Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_O02
         (914 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075564-1|AAL68371.1|  161|Drosophila melanogaster RH68528p pro...    30   3.8  
AY071607-1|AAL49229.1|  174|Drosophila melanogaster RE65554p pro...    30   3.8  
AE014134-1930|AAF52990.2|  161|Drosophila melanogaster CG7296-PA...    30   3.8  

>AY075564-1|AAL68371.1|  161|Drosophila melanogaster RH68528p
           protein.
          Length = 161

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 19/42 (45%), Positives = 19/42 (45%)
 Frame = -2

Query: 586 PXFGGGKXFXGXXGFFLXXXFXFXGXPPXFXXGGXXXXGGGP 461
           P FGGG  F G  GF     F   G  P F  GG    GGGP
Sbjct: 42  PGFGGGPGFGGGPGFGGGPGF---GGRPGF--GGGPGFGGGP 78



 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -2

Query: 586 PXFGGGKXFXGXXGFFLXXXF--XFXGXPPXFXXGGXXXXGGGPP 458
           P FGGG+ F G  GF     F   F G P     GG    GGG P
Sbjct: 78  PGFGGGQGFGGRPGFGGGPGFGGGFGGGP---GFGGGSGFGGGRP 119


>AY071607-1|AAL49229.1|  174|Drosophila melanogaster RE65554p
           protein.
          Length = 174

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 19/42 (45%), Positives = 19/42 (45%)
 Frame = -2

Query: 586 PXFGGGKXFXGXXGFFLXXXFXFXGXPPXFXXGGXXXXGGGP 461
           P FGGG  F G  GF     F   G  P F  GG    GGGP
Sbjct: 42  PGFGGGPGFGGGPGFGGGPGF---GGRPGF--GGGPGFGGGP 78


>AE014134-1930|AAF52990.2|  161|Drosophila melanogaster CG7296-PA
           protein.
          Length = 161

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 19/42 (45%), Positives = 19/42 (45%)
 Frame = -2

Query: 586 PXFGGGKXFXGXXGFFLXXXFXFXGXPPXFXXGGXXXXGGGP 461
           P FGGG  F G  GF     F   G  P F  GG    GGGP
Sbjct: 42  PGFGGGPGFGGGPGFGGGPGF---GGRPGF--GGGPGFGGGP 78



 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -2

Query: 586 PXFGGGKXFXGXXGFFLXXXF--XFXGXPPXFXXGGXXXXGGGPP 458
           P FGGG+ F G  GF     F   F G P     GG    GGG P
Sbjct: 78  PGFGGGQGFGGRPGFGGGPGFGGGFGGGP---GFGGGSGFGGGRP 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,337,763
Number of Sequences: 53049
Number of extensions: 196477
Number of successful extensions: 237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)