Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_N13
(1000 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.083
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.25
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.25
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.78
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.8
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 4.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 9.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 42.3 bits (95), Expect = 1e-04
Identities = 36/138 (26%), Positives = 43/138 (31%), Gaps = 6/138 (4%)
Frame = +1
Query: 430 RRGGXPPXXGGX-----PXXPXXPDATAPXXXXXXXXSXXXXXPXX-QXXXXPGXXAPRX 591
R G PP G P P P + A P + G P
Sbjct: 320 RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Query: 592 TPGRPRXXPPXXXXXCXGRGXXPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGP 771
+ R PP GR PP G +R P P ++ PPS PP PP P
Sbjct: 380 SSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL-PPS--APPSLPPSAP 436
Query: 772 PXXRXGPXSRXXRPPPXP 825
P G + PP P
Sbjct: 437 PSLPMGAPAAPPLPPSAP 454
Score = 30.3 bits (65), Expect = 0.44
Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Frame = +1
Query: 580 APRXTPGRPRXXPPXXXXXCXGRGXXPXPP---GGAXARXRXPAXPRXSAIXPPSXXXP- 747
AP P P PP P PP G + P P P+
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 748 -PPRPPXGPPXXRXGPXSRXXRPPPXPXGXRXXR 846
PP PP + RPPP P R R
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNR 322
Score = 29.9 bits (64), Expect = 0.59
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 684 PXSXARGPPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAP 827
P PP L AP PP A PP A P PA AP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/99 (24%), Positives = 27/99 (27%)
Frame = +1
Query: 475 PXXPDATAPXXXXXXXXSXXXXXPXXQXXXXPGXXAPRXTPGRPRXXPPXXXXXCXGRGX 654
P P +AP S P P P P P P G
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP-------MGAPA 445
Query: 655 XPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGP 771
P P A PA + PP+ PPP P P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.4
Identities = 24/96 (25%), Positives = 27/96 (28%)
Frame = +1
Query: 616 PPXXXXXCXGRGXXPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXRXGPX 795
PP RG P G + + P P S P R PP R P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 796 SRXXRPPPXPXGXRXXRXXAGPAPXXXLRRAXXXRP 903
+ R PP R P P R A P
Sbjct: 372 T--GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 27.5 bits (58), Expect = 3.1
Identities = 28/129 (21%), Positives = 34/129 (26%)
Frame = +1
Query: 439 GXPPXXGGXPXXPXXPDATAPXXXXXXXXSXXXXXPXXQXXXXPGXXAPRXTPGRPRXXP 618
G P P P P + P P +P +P RP P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVS---SPPNSPPRP-IAP 277
Query: 619 PXXXXXCXGRGXXPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXRXGPXS 798
P PP + A + PP PP R G P G +
Sbjct: 278 VSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP----PPSRRNRGKPPIGNGSSN 333
Query: 799 RXXRPPPXP 825
PPP P
Sbjct: 334 SSLPPPPPP 342
Score = 26.6 bits (56), Expect = 5.5
Identities = 23/110 (20%), Positives = 28/110 (25%)
Frame = +3
Query: 648 GXQXGPPGRRXXPXSXARGPPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAP 827
G PP P + P + + PP A + P P R
Sbjct: 262 GTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRN 321
Query: 828 XGXGXTXRRGPGPXXPPXPGPXGXXTXPXPXXTAGGDXPAXXGGLTPXPP 977
G PP P P P A G P G + PP
Sbjct: 322 RGKPPIGNGSSNSSLPPPP--------PPPRSNAAGSIPLPPQGRSAPPP 363
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/105 (26%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Frame = +3
Query: 684 PXSXARGPPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAPX---GXGXTXRR 854
P G P + + P P+ PP A P P+ AP G
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 855 GPGPXXPPXPGPXGXXTXPXPXXTAGGDXPAXXGGLTPXPPXXXG 989
P PP P P G P P A PA G+ P P G
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 31.5 bits (68), Expect = 0.19
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = +3
Query: 663 PPGRRXXPXSXARGPPXLRDXAPLXXXP-PPPAXPGPPXXAXRXGEPXXAPAXRAPXGXG 839
P G P PP AP P P P+ PP A G P P + G
Sbjct: 1136 PSGAPPVPKPSVAAPPV---PAPSGAPPVPKPSVAAPPVPAPSSGIP---PVPKPAAGVP 1189
Query: 840 XTXRRGPGPXXPPXPGPXGXXTXPXPXXTAGGDXPAXXGGLTPXP 974
P PP P P P P + P GL P P
Sbjct: 1190 PVP---PPSEAPPVPKP-SVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.78
Identities = 23/90 (25%), Positives = 27/90 (30%)
Frame = +3
Query: 705 PPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAPXGXGXTXRRGPGPXXPPXP 884
PP + + PPP P P P AP AP G + P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPP--VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK--PSVAAPPVP 1105
Query: 885 GPXGXXTXPXPXXTAGGDXPAXXGGLTPXP 974
P P P + P P P
Sbjct: 1106 KP-SVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.9 bits (59), Expect = 2.4
Identities = 25/110 (22%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +3
Query: 666 PGRRXXPXSXARGPPXLRDXAPLXXXPP-------PPAXPGPPXXAXRXGEPXXAPAXRA 824
P + P + P APL PP P P P A P AP
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI 1045
Query: 825 PXGXGXTXRRGPGPXXPPXPGPXGXXTXPXPXXTAGGDXPAXXGGLTPXP 974
P + G P P P P +G G+ P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.083
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 664 PPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXRXGPXSRXXRPPPXP 825
P R + A P+ SA PP P PP PP GP S PPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAP--PPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 643 GRGXXPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXRXGPXSRXXRPPP 819
G+ P A A + R PP PPP P PP P PPP
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 30.7 bits (66), Expect = 0.34
Identities = 21/94 (22%), Positives = 26/94 (27%)
Frame = +3
Query: 696 ARGPPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAPXGXGXTXRRGPGPXXP 875
A G P LR PP+ P PP P AP + P
Sbjct: 106 AGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP 165
Query: 876 PXPGPXGXXTXPXPXXTAGGDXPAXXGGLTPXPP 977
P P P + P+ + P PP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 663 PPGRRXXPXSXARGPPXLRDXAPLXXXPPPPAXPGPP 773
PP P S A PP P+ PPPA P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/78 (23%), Positives = 20/78 (25%)
Frame = +1
Query: 583 PRXTPGRPRXXPPXXXXXCXGRGXXPXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPP 762
P P P PP P P A P+ P + PP PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 763 XGPPXXRXGPXSRXXRPP 816
P PP
Sbjct: 207 SQAPVANTSSRPSSFAPP 224
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +1
Query: 745 PPPRPPXGPPXXRXGPXSRXXRPPPXPXGXRXXRXXAGPAPXXXLRRAXXXR 900
PP PP PP P S+ PPP P G R PA L + R
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP--PPPPPPGYVKKRKNKTPAQSGNLEKQLNER 54
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/74 (31%), Positives = 27/74 (36%)
Frame = +3
Query: 663 PPGRRXXPXSXARGPPXLRDXAPLXXXPPPPAXPGPPXXAXRXGEPXXAPAXRAPXGXGX 842
PP + A P + AP+ PPPP P PP A G P P A G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP--PPPPGVAG-AGPPPPPPPPPA-VSAGG 789
Query: 843 TXRRGPGPXXPPXP 884
+ P P P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.5
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +1
Query: 658 PXPPGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXR-XGPXSRXXRPPPXPXGX 834
P PP A PA P + PP+ P PP PP GP PPP P
Sbjct: 732 PPPPPPAVI-VPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPPAVS 786
Query: 835 RXXRXXAGPAP 867
PAP
Sbjct: 787 AGGSRYYAPAP 797
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 29.5 bits (63), Expect = 0.78
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 818 GGGRXXRLXGPXRXXGGPXGGRGGGXXXEG 729
GGG L GP GG GGR GG G
Sbjct: 112 GGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = -3
Query: 824 GXGGGRXXRLXGPXRXXGGPXGGRGGGXXXEGGXIAEXRGXAG 696
G GGG GP GGP GG GGG GG G G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGP-GGFGGGLGGFGGGPGGFGGGPG 266
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = -3
Query: 866 GAGPAXXRXXRXPXGXGGGRXXRLXGPXRXXGGPXGGRGGGXXXEGG 726
G GP P G GGG G GGP GG GGG GG
Sbjct: 227 GGGPGGFEGG--PGGFGGGPGGFGGGLGGFGGGP-GGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 815 GGRXXRLXGPXRXXGGPXGGRGGGXXXEGGXIAEXRGXAG 696
GG GP GGP GG GGG GG + G G
Sbjct: 221 GGHGGFGGGPGGFEGGP-GGFGGGPGGFGGGLGGFGGGPG 259
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 824 GXGGGRXXRLXGPXRXXGGPXGGRGGGXXXEGGXIAEXRGXAG 696
G GGGR G G GGRGG GG G G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -3
Query: 824 GXGGGRXXRLXGPXRXXGGPXGGRGGGXXXEGGXIAEXRGXAGXRXRA 681
G GGR G GG GG GG GG G +G R A
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 824 GXGGGRXXRLXGPXRXXGGPXGGRGGGXXXEGGXIAEXRGXAGXRXRA 681
G GGR G GG G GG GG RG G R A
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +1
Query: 667 PGGAXARXRXPAXPRXSAIXPPSXXXPPPRPPXGPPXXRXGPXSRXXRPPPXPXGXRXXR 846
P P P SA PP+ PP P P P +PP P G
Sbjct: 474 PSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPP 533
Query: 847 XXAGPAP 867
P P
Sbjct: 534 GMPAPFP 540
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 810 PAXRAPXGXGXTXRRGPGPXXPPXPGPXGXXTXPXPXXTAGGDXPAXXGGL 962
P AP T P P P P P P GG P G L
Sbjct: 11 PRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTAVQGGSSPGFFGNL 61
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 9.5
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 9/89 (10%)
Frame = +3
Query: 645 PGXQXGPPGRRXXPXSXARGPPXLRDXAPLXXXPPPPA--XPG----PPXXAXRXGEPXX 806
PG PP P PP + P PPPP PG PP GE
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHE--PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 260
Query: 807 APAXRAPXG---XGXTXRRGPGPXXPPXP 884
P G PG PP P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 9.5
Identities = 25/89 (28%), Positives = 26/89 (29%), Gaps = 9/89 (10%)
Frame = +3
Query: 645 PGXQXGPPGRRXXPXSXARGPPXLRDXAPLXXXPPPPA--XPG----PPXXAXRXGEPXX 806
PG PP P PP + P PPPP PG PP GE
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHE--PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 312
Query: 807 APAXRAPXG---XGXTXRRGPGPXXPPXP 884
P G PG PP P
Sbjct: 313 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,836,028
Number of Sequences: 5004
Number of extensions: 23003
Number of successful extensions: 182
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 517271174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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