Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_N10
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   248   5e-68
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    30   0.033
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   2.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   5.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   6.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.6  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   8.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  248 bits (607), Expect = 5e-68
 Identities = 120/235 (51%), Positives = 167/235 (71%), Gaps = 1/235 (0%)
 Frame = +1

Query: 175 IFYPLLGLTTAIWILYRWQQNSHMHKLAELLPGPAPIPIFGNALTLMRKSPHELVNLALG 354
           +F  LL     ++ +Y      H+ +LAE +PGP  +P+ GNAL L   SP  + +  L 
Sbjct: 14  VFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFG-SPDAMFSQVLK 72

Query: 355 YAQTFGNVVRVWLGSKLIVFLADADDIEIILNSHVHIDKATEYKFFKPWLGEGLLISSGP 534
            A+ F +VV++W+G KL++ L D  D+EIIL+S+V+IDK+TEY+FFKPWLG+GLLIS+G 
Sbjct: 73  KAENFKDVVKIWVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQ 132

Query: 535 KWRSHRKMIAPTFHINILKSFVGIFNQNSNNVVEKLKSEVGKTFDVHDYMSGTTVDILLE 714
           KWR+HRK+IAPTFH+N+LKSF+ +FN N+ +VVEK++ E GK FD H+YMS  TVDILLE
Sbjct: 133 KWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDILLE 192

Query: 715 TAMGISRKTQDESXFDYAMAVMK-CAISSTKXTTNLGCEPRMFQVDFVFNTTNFG 876
           TAMG+S+ T+D + F+YAMAVMK C I   +  T +   P     D++FN T +G
Sbjct: 193 TAMGVSKPTRDHNAFEYAMAVMKMCDILHLRH-TKIWLRP-----DWLFNLTKYG 241



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 810 YKFGMRTENVSS*LRL*HNKLWAYPDF 890
           +++ M    +   L L H K+W  PD+
Sbjct: 207 FEYAMAVMKMCDILHLRHTKIWLRPDW 233


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 12/206 (5%)
 Frame = +1

Query: 178 FYPLLGLTTAIWILYRWQQNSHMHKLAELLPGPAPIPIFGNA--LTLMRKSPHELVNLAL 351
           F  L G+      LY +  ++     +  + GP P+P FG    L L++KS    V    
Sbjct: 5   FEILCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVK--- 61

Query: 352 GYAQTFGNVVRVWLGSKLIVFLADADDIEIILNSHVH-IDKATE-----YKFFKPWLGEG 513
              + + N   V L +    FL   +D E+I +  +    K        ++  +P L   
Sbjct: 62  DIYEKYKNEPMVGLYATRSPFLL-LNDPELIKDILIRDFSKFANRGLGVFERTEP-LSPH 119

Query: 514 LLISSGPKWRSHRKMIAPTFHINILKSFVGIFNQNSNNVVEKLKS--EVGKTFDVHDYMS 687
           LL     +WR  R  ++P F    LK    +  + S N+   L    E  +  +  +  +
Sbjct: 120 LLNLEVERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTA 179

Query: 688 GTTVDILLETAMGI--SRKTQDESXF 759
             T D++   A GI  S  T + S F
Sbjct: 180 RFTTDVIGSCAFGIDMSSMTNENSEF 205


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 565 PTFHINILKSFVG 603
           PT+ +NILKS VG
Sbjct: 126 PTWEVNILKSIVG 138


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 196 LTTAIWILYRWQQNSHMHKLAE 261
           LTT +W+ + WQ +      AE
Sbjct: 67  LTTNVWLEHEWQDHKFQWDPAE 88


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 119 VK*RAWWMRPRD 154
           +K + WW RPR+
Sbjct: 40  IKRKRWWSRPRE 51


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 250 KLAELLPGPAPIPIFG 297
           K    +PGP  +PIFG
Sbjct: 48  KTVSKVPGPFSLPIFG 63


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 260 SASLCICEFCCHLYR 216
           S +L +CEFC   YR
Sbjct: 32  SDTLYVCEFCNRRYR 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,553
Number of Sequences: 438
Number of extensions: 6151
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)