Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M21
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0382 - 22501041-22501279,22501717-22501810                       36   0.044
03_06_0471 + 34169562-34169892,34170121-34170347                       33   0.41 
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           32   0.72 
01_01_0082 + 625198-625719                                             29   5.1  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    28   8.9  
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241     28   8.9  
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122...    28   8.9  

>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 35.9 bits (79), Expect = 0.044
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +1

Query: 97  KFFMIFVLALLA--MANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI 270
           K  ++F L L A  +A+A+      +N      +E     P   +PP    P+ + Y+P 
Sbjct: 11  KALLVFALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPP----PSPDYYDPP 66

Query: 271 DNGAYYVDPPRRPYFKPTPFPGARGG 348
            +  YY  PP   Y+ P P P   GG
Sbjct: 67  HSPDYYDPPPSPDYYDPPPSPYYGGG 92


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 190 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP-PRRPYFKPTPFPG 336
           Y P    P    PP  Y P+  GY P   GAY     P++P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
 Frame = +1

Query: 151 PVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPRRPYFKP 321
           P    +  +    Y P  + P  V PP  Y P  +G  P     N + Y  P  RP   P
Sbjct: 381 PPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMYEPPVGRPNSGP 440

Query: 322 TPFPGARG 345
            P  GA G
Sbjct: 441 PPSYGAGG 448


>01_01_0082 + 625198-625719
          Length = 173

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 181 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPRRPYFKPTPF-PGARGG 348
           G GY P  +     NP   YNP  +G+    N   Y+ PP   Y +   F P A  G
Sbjct: 100 GGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPPGTLYPQDPGFRPNAAAG 152


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 196 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPRRPYFKPTPFP 333
           P  + P IV  P  Y P+   YEP     Y  +PP    + P  FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPYPPGIFP 680


>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
          Length = 1445

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/76 (22%), Positives = 31/76 (40%)
 Frame = +1

Query: 115  VLALLAMANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVD 294
            V+ L  +   +  +R VEN  SGN +E      Y+++    +    N     +  A  +D
Sbjct: 1153 VIVLKPLPLQKSIIRKVENVGSGNNFE----HEYVISLASTHPSLVNAINMTEEEASLID 1208

Query: 295  PPRRPYFKPTPFPGAR 342
             P     +  P+ G +
Sbjct: 1209 KPMLERLRSNPYEGVK 1224


>01_05_0647 +
           23910318-23910694,23911732-23911867,23912067-23912277,
           23912357-23912724,23913793-23914081,23914173-23914372,
           23914452-23914646
          Length = 591

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 226 PPKDYNPNGNGYEPIDNGAYYVDPPRRPYFK-PTPFP 333
           P  +  P  + Y P    AY + PP +PY + P P+P
Sbjct: 63  PEPEPTPVNHHYPPPTTPAYSLPPPAQPYGQYPYPYP 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,781,968
Number of Sequences: 37544
Number of extensions: 443049
Number of successful extensions: 1061
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)