Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_M21
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 39 0.006
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 35 0.070
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.28
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.28
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.28
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 31 1.1
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 31 1.1
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 31 1.5
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 30 2.0
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 3.5
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 3.5
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 29 4.6
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 29 6.0
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
TPT ET T TT T+ TTT ET T +TT T T P T++
Sbjct: 111 TPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +2
Query: 140 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
T TP PT T T TT T+ TTT T T +TT T T P T +
Sbjct: 206 TTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQT 265
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 140 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTS 316
T TP TPT T T TT T+ +TTT T T +TT T T T+
Sbjct: 84 TTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT 142
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLP 325
TPT T T TT T+ TTT T +TT T T T++ P
Sbjct: 124 TPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 140 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTT-LMETATNLSTTVHITWTLPADLTS 316
T TP TPT T T TT + TTT ET T +TT T T T+
Sbjct: 77 TPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTT 136
Query: 317 S 319
+
Sbjct: 137 T 137
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 35.1 bits (77), Expect = 0.070
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 122 LCWLWPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TW 292
LC+LW L T T T T T+ + T T++++ TTT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236
Query: 293 TLPA-DLTSSLPLS 331
T+P + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 176 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
T T T TT+ T+ P TTT T STT T T P TS+
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTST 108
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 301
TPT T+T TT T TTT T T +T T T+P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSLV 337
T T T T TT T+ P TTT T T + T T T S PL+ V
Sbjct: 89 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 160 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 300
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 140 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
T TP TPT T T TT T+ P TTT T T ++T T T A T++
Sbjct: 265 TTTTPTTTTTTPTTTTTTP-TTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTT 323
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSLVLA 343
TPT T T TT + TTT T T STT T T T++ P + A
Sbjct: 268 TPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTA 325
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 149 TPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPADLTSSLP 325
TP TPT T T TT TS P TTT T T STT T T+ ++ P
Sbjct: 286 TPTTTTTTPTT-TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTP 344
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPL 328
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 501 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 552
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPL 328
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 342 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 393
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPL 328
+T T T TTA T+ PK TT ETAT S+T +T P +TS+ L
Sbjct: 382 QTSTTVPTTPSKTTA-TTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTL 433
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 137 PTLKTPLG*WKTPTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTV 280
PT L T T+ TA T + T ART+ P TTT + + T L TT+
Sbjct: 368 PTTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTL 417
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 155 LG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSL 334
+G +TP T+T TTA + P TT + T+ TV T + T ++P +
Sbjct: 223 IGTTQTPPVTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVPTTT 282
Query: 335 V 337
V
Sbjct: 283 V 283
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 173 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSLVLAVGS 352
PT+ + T+ TTT + T T TT IT T+P+ T+ +P L L VG+
Sbjct: 201 PTEVVPVKEIEEETTTTTTTTTTTQLPTTT---TTEEITTTMPSGPTTEVPFDL-LIVGN 256
Query: 353 K 355
+
Sbjct: 257 R 257
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTT 244
KT Q T T + TT RTS +P TTT
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTT 313
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 301
T T A N+ TT T+ I P T T T +TTV T T P
Sbjct: 30 TTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 164 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
W P ET TT T+ +P TTT+ T T +T T T A T++
Sbjct: 298 WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTT 348
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 164 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
W P ET TT T+ +P TTT+ T T +T T T A T++
Sbjct: 298 WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTT 348
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 125 CWLWPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPA 304
C L P P TPT T T + +T ++ TT+++ T T STT T T
Sbjct: 251 CGLVPETTKPTT--TTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTP 308
Query: 305 DLTSSL 322
T+++
Sbjct: 309 TTTTTM 314
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 175 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPRRPY 312
D+ N Y+P++ +VNP K + NG+ + + + A Y VDPP+ +
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPKNSW 874
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 408 F*NIL-LIHYFVINFLRYSLLPTASTRERGRLEVRSAGRVHVICTVVDRFVAVSI 247
F N+L + Y V +FLR ++PT GR ++ + RV++ + FV +++
Sbjct: 270 FSNLLKTLSYEVKDFLRVFIVPTLGEYHEGRKQLENDSRVYMAVFYAEVFVKLTL 324
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSL 334
+TP+ +A +L+ L++ +T + + N+S + I+WT+ ++ ++L L L
Sbjct: 377 QTPSHSSAHPILSKNFDKLVVGFSTMDLNSLLNMSPFIEISWTIISEKDTNLFLKL 432
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 167 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLS 331
+T T E ++L+ + TT T T +TT+ T + P + +S P+S
Sbjct: 309 ETMTIEEESDLIDDVESEETTSTTTPRTTTTTTTTTTITTTTSAPTTIATSTPIS 363
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 170 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLPLSL 334
TP T T TT + + TTT T T TT T T+S+P ++
Sbjct: 416 TPLPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTI 470
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 179 QETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSS 319
++T T+ + + I P+ ++ LSTT +T T P+ TSS
Sbjct: 421 EQTTTSKMPSTDDDYITPEMSSTASMEITLSTTSDLTSTYPSTFTSS 467
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 176 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLP 325
T T T +T T+L TTT T T + +I T+P T+ P
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSP 262
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 176 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPADLTSSLP 325
T T T +T T+L TTT T T + +I T+P T+ P
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSP 262
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +1
Query: 190 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPRRPYFKPTP 327
Y+P + P P P GY P G YY + PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVP-QQGGYYPQGQQGPYYPQQP 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,078,258
Number of Sequences: 27780
Number of extensions: 369725
Number of successful extensions: 1058
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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