Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M19
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    29   3.8  
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    29   5.0  
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    29   6.7  
03_06_0690 - 35571816-35572586                                         28   8.8  

>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 440 ETFYKSACCARVHLNQGQFLYAF-YIGVIQRPDCHGF 547
           ETF+ +AC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +1

Query: 457 CLLCACASQSRSILVCLLHRCYPAP 531
           CL C     SR ILVC L RC  AP
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAP 82


>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
            852330-852409,852506-852848,853068-853166,853240-853360,
            853567-853723,853976-854099,855275-855368,855866-857259,
            857882-857924,858240-858458,859379-859605,859701-859948,
            860246-860552,860725-861153
          Length = 1486

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 664  LSCGFRTNEAMLHLCYVNFLQHFHIHKHLRVYFIR 560
            L  GFR + A+ +LC + +L+   I K LR   IR
Sbjct: 1002 LKAGFRLSSALFYLCNILWLRAVKIRKKLRRQGIR 1036


>03_06_0690 - 35571816-35572586
          Length = 256

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 124 AERDGYKPSQNQDKTSWFPA 65
           A R G KP+Q + +T+W PA
Sbjct: 109 AHRRGQKPAQRRPRTAWIPA 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,463,864
Number of Sequences: 37544
Number of extensions: 397508
Number of successful extensions: 794
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)