Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M18
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1040 - 33709588-33709880,33709960-33710200,33710498-337106...    63   3e-10
03_04_0246 - 19324858-19325159,19325239-19325479,19326420-193265...    33   0.41 
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829...    30   2.9  
11_03_0173 + 11162708-11163010                                         29   3.9  

>02_05_1040 -
           33709588-33709880,33709960-33710200,33710498-33710672,
           33710781-33710892,33711906-33712145,33712253-33712436
          Length = 414

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 31/101 (30%), Positives = 49/101 (48%)
 Frame = +1

Query: 601 LIMIGVKSSKDPRAGIQNGFWAIKYLLVXXXXXXXXXXXXXXXASTWXVFGMIGGFCYIV 780
           +IM G+K  KDPR  I +G W  K +                  S +      G   +++
Sbjct: 96  IIMAGIKDQKDPRDKIHHGGWMAK-IFCWVVIVFLMFFVPNGVVSFYESISKFGSGLFLL 154

Query: 781 IQLILIIDFAHSWAEIWVSKYEETESKGWYAALLIPMLTCF 903
           +Q++L++DF H W E WV+K E+     WY ALL+  + C+
Sbjct: 155 VQVVLLLDFVHGWNENWVAKDEQF----WYMALLVVSVVCY 191


>03_04_0246 -
           19324858-19325159,19325239-19325479,19326420-19326594,
           19326681-19326748,19327248-19327365,19327979-19328007
          Length = 310

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +1

Query: 787 LILIIDFAHSWAEIWVSKYEETESKGWYAALLIPMLTCF 903
           +++++DF ++W + W+ K E+     W  ALL+  + C+
Sbjct: 50  VVMLLDFTNNWNDSWIEKDEQK----WEIALLVVTVVCY 84


>03_06_0331 -
           33181757-33181795,33182325-33182453,33182941-33182967,
           33183459-33183545,33183827-33183975,33185467-33185521,
           33185596-33187584,33188705-33188782
          Length = 850

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/76 (23%), Positives = 31/76 (40%)
 Frame = -2

Query: 511 FPGNSPVTVLSVAFVQNGSF*SSLCNPGAKVIQHTIVTSTSISAYIRREEVELVQDGHAE 332
           FPG SP+   +  F QN    + L +P      +   ++ S  A I+RE++   +     
Sbjct: 472 FPGESPLQCSATDFGQNSEHNTCLVSPATSPASNVEHSNVSDKALIKREDMTNTEPSSQP 531

Query: 331 QHSEQAVLPQQHASCA 284
            +       Q+  S A
Sbjct: 532 MNLSPPTSEQKEGSTA 547


>11_03_0173 + 11162708-11163010
          Length = 100

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 798 DKDELDNNVAEASNHSKHXPCRSKLTSWDEECSDNATNNQ*IFDGPKTILNSSSWIFR 625
           +++E  ++ AE SN +        LT W   C D       IFDG  T +N++ W+ R
Sbjct: 7   EEEEDGSHSAEVSNDAARVVRGMTLTRWTSMCLD-------IFDGSGTPVNAADWMRR 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,515,034
Number of Sequences: 37544
Number of extensions: 456834
Number of successful extensions: 1140
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)