Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M18
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    25   0.72 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   5.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   5.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   8.9  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   8.9  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +1

Query: 739 WXVFGM-IGGFCYIVIQLILII 801
           W + G  +GGFC+ +IQ+ +II
Sbjct: 3   WRMTGTWVGGFCHSIIQIPVII 24


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 375 MYALMLVLVTIVCCI 419
           +Y L+ VLVTI C I
Sbjct: 3   IYILLFVLVTITCVI 17


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 375 MYALMLVLVTIVCCI 419
           +Y L+ VLVTI C I
Sbjct: 3   IYILLFVLVTITCVI 17


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 105 KQNSEFVTGNQDKKINNNLNLKEFHYS 25
           K+N      NQ+ + +NN N  + H+S
Sbjct: 514 KRNGNRQNDNQNNQNDNNRNDNQVHHS 540


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 156 NIKIQILVIWNVNCST*NKHHN 221
           N+    ++IW ++CS   K HN
Sbjct: 14  NLNQNQMMIWALDCSIKPKDHN 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,442
Number of Sequences: 438
Number of extensions: 5101
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)