Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M16
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   134   6e-32
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   134   1e-31
Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical pr...    29   3.5  
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical ...    28   8.1  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  134 bits (325), Expect = 6e-32
 Identities = 64/133 (48%), Positives = 86/133 (64%)
 Frame = +3

Query: 453 RGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLNYAAYN 632
           +G QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  C+ VR+L++  AY 
Sbjct: 80  QGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCNGVRRLIDLGAYL 136

Query: 633 SWVQNSLVQATYWHDPLDERTYXANSVFLADINNVRTVNKTYIQNLNNLXRFVLVMFDND 812
            +VQ  +VQA YWHDP     Y   S+FLADINN    N TY +NL +L   VLV F+ D
Sbjct: 137 PFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPTYKRNLLSLKNLVLVKFNQD 196

Query: 813 SIXXPKXTEWFXF 851
            +  PK + WF F
Sbjct: 197 HMVVPKDSSWFGF 209



 Score =  100 bits (240), Expect = 1e-21
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = +2

Query: 215 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 394
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 395 EKLAADPKLSNGFNVMGFSQG 457
            K+  DP+L NG+N +GFSQG
Sbjct: 61  IKIKNDPELKNGYNAIGFSQG 81


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  134 bits (323), Expect = 1e-31
 Identities = 64/133 (48%), Positives = 86/133 (64%)
 Frame = +3

Query: 453 RGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDVRKLLNYAAYN 632
           +G QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  C+ VR+L++  AY 
Sbjct: 80  QGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIMCNGVRRLIDLGAYL 136

Query: 633 SWVQNSLVQATYWHDPLDERTYXANSVFLADINNVRTVNKTYIQNLNNLXRFVLVMFDND 812
            +VQ  +VQA YWHDP     Y   S+FLADINN    N TY +NL +L   VLV F+ D
Sbjct: 137 PFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINNENNNNPTYKRNLLSLKNLVLVKFNQD 196

Query: 813 SIXXPKXTEWFXF 851
            +  PK + WF F
Sbjct: 197 HMVVPKDSXWFGF 209



 Score =  100 bits (240), Expect = 1e-21
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = +2

Query: 215 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 394
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 395 EKLAADPKLSNGFNVMGFSQG 457
            K+  DP+L NG+N +GFSQG
Sbjct: 61  IKIKNDPELKNGYNAIGFSQG 81


>Z48783-6|CAA88700.1|  371|Caenorhabditis elegans Hypothetical
           protein F33H1.5 protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 775 LFKFCIYVLLTVLTLLMSARNTLFA--SYVRSSKGSCQYVA 659
           LF F I+ LLT +  L++ + T+F+  S      G C+YV+
Sbjct: 65  LFNFAIFDLLTCVASLLACQKTIFSGLSLTYIFHGPCKYVS 105


>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
           protein F44E2.4 protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 429 DSMSWVSHRGCQFIRAVVQRC--GHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCDDV 602
           D+  WVS+   +F  A+  RC  G +LP +  +V +G   +    I HC A  ++    V
Sbjct: 780 DAADWVSNYIIRFANAIDVRCKVGRQLP-VGRVVGIGCSAEEESIIEHCAAPLNDIGSRV 838

Query: 603 RKL 611
            +L
Sbjct: 839 EEL 841


>AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical
           protein E03H12.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 784 LXRLFKFCIYVLLTVLTLLMSARNTLFASYVRSSKGSCQYVA*TSEF 644
           L   F FC +++  +L L  S    LF  Y  S    C+    TS F
Sbjct: 27  LSMFFSFCFFIISIILELNASVNMLLFWGYPASDTKFCEPQLKTSTF 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,115,268
Number of Sequences: 27780
Number of extensions: 397125
Number of successful extensions: 874
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)