Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M15
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39651-6|AAL11483.1|  286|Caenorhabditis elegans Temporarily ass...    30   2.6  
U39651-5|AAL11482.2|  395|Caenorhabditis elegans Temporarily ass...    30   2.6  
Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical ...    29   6.1  
Z81517-1|CAB04208.1|  520|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AF106579-7|AAC78199.2|  391|Caenorhabditis elegans Hypothetical ...    28   8.0  

>U39651-6|AAL11483.1|  286|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 22, isoform b protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 274 LKSSEKYPASIRA*LLHMIEAKTLCTLGGQDGIYKFNHATKSAKNLRITNYSIRQMFHSP 453
           ++ SE  P  +    +  IE      +   DG+ K  + T    N  I +Y+   +F SP
Sbjct: 216 VRDSESNPGDLSI-SMRGIERNKHFKVQNVDGLLKIGNRTFVDMNALINHYTTSPIFSSP 274

Query: 454 THGLFFT 474
           T  LF T
Sbjct: 275 TEKLFLT 281


>U39651-5|AAL11482.2|  395|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 22, isoform a protein.
          Length = 395

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 274 LKSSEKYPASIRA*LLHMIEAKTLCTLGGQDGIYKFNHATKSAKNLRITNYSIRQMFHSP 453
           ++ SE  P  +    +  IE      +   DG+ K  + T    N  I +Y+   +F SP
Sbjct: 325 VRDSESNPGDLSI-SMRGIERNKHFKVQNVDGLLKIGNRTFVDMNALINHYTTSPIFSSP 383

Query: 454 THGLFFT 474
           T  LF T
Sbjct: 384 TEKLFLT 390


>Z73098-9|CAA97335.1|  141|Caenorhabditis elegans Hypothetical
           protein T21C9.8 protein.
          Length = 141

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -1

Query: 773 KTSSNIPPFSLDEKIAFGVEKYNLSSKSLANPLTGITCKC 654
           K   +IP ++++    FGV+ Y++ + +LA+  +G T  C
Sbjct: 100 KLRIDIPHYAINSGQNFGVDNYDIGTLNLADQFSGETTDC 139


>AC024808-5|AAK29931.1|  789|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.8 protein.
          Length = 789

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 529 IVPELTDIKTSLIADSKKYNIYFANSAGIFVLTN 630
           I+P + D++ S++ +SK YN Y A S G    +N
Sbjct: 176 IMPPMEDVQESIVKESKTYN-YAAASGGSLPFSN 208


>Z81517-1|CAB04208.1|  520|Caenorhabditis elegans Hypothetical
           protein F28B1.1 protein.
          Length = 520

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 673 VNGFASDFDDR--LYFSTPNAIFSSNENGGILEEVFRVEESETILGLXL 813
           +N   S  DD+  LY +T +AI+S    GG    + R E+   + G  L
Sbjct: 347 INARCSASDDKPFLYSTTTDAIYSGKGKGGYASSIHRYEDLLCVRGKEL 395


>AF106579-7|AAC78199.2|  391|Caenorhabditis elegans Hypothetical
           protein F54E2.1 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
 Frame = +1

Query: 451 PTHGLFFTTFNPEEKAFVYSY-GQVGDIVPE-LTDIKTS-LIADSKKYNI----YFANSA 609
           P H   FT +     A V  Y G   D++ +  T I ++ ++A  K   I     FA + 
Sbjct: 159 PAHSSLFTKWQQPRDATVKMYKGYPTDVLEKNSTQIFSNPVLATGKLLYIPTVETFAVTL 218

Query: 610 GIFVLTNINGVLFKVHLHVIPVNGFAS 690
           GIF +   N V F+V    I  NG+++
Sbjct: 219 GIFYMKTTNDVYFQVDSRNIDFNGYST 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,221,651
Number of Sequences: 27780
Number of extensions: 409014
Number of successful extensions: 1146
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)