Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_M14
(1138 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 31 1.3
03_01_0515 - 3864796-3865425 27 1.4
01_06_0146 + 26969011-26969995,26970878-26970930 25 1.7
03_02_0816 + 11487811-11488708,11488835-11489235 31 2.2
12_02_1174 - 26696869-26698191 29 5.2
03_03_0164 - 14979364-14979479,14979613-14980102 29 5.2
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 25 5.8
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 6.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 25 7.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 9.0
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 29 9.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 9.0
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 995 PXXPRGXPPXTXXAPXXAGPRGXXAXXGPGGGG 897
P P+G PP P AG A G GGGG
Sbjct: 11 PELPQGTPPRPQLPPAFAGAGAVLAGSGSGGGG 43
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.1 bits (57), Expect(2) = 1.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 871 TTXXPXPKXPPPPGPXXAXHPRGP 942
T+ P P PPPP P A P P
Sbjct: 80 TSSPPPPPLPPPPPPPAASPPPPP 103
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPA 945
P P PPPP P + P PA
Sbjct: 101 PPPPSPPPPSPVKSSPPPPPA 121
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 14/57 (24%), Positives = 15/57 (26%)
Frame = +1
Query: 580 PXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P P E P P P P L P PP + P P
Sbjct: 31 PSPEAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPP 87
Score = 22.2 bits (45), Expect(2) = 3.0
Identities = 15/67 (22%), Positives = 17/67 (25%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P PP + P P P P P PP A P P
Sbjct: 43 PTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Query: 751 AXNXXAP 771
+ P
Sbjct: 103 PPSPPPP 109
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 25.4 bits (53), Expect(2) = 1.7
Identities = 17/70 (24%), Positives = 19/70 (27%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P P PP P P P P P P P + A P P
Sbjct: 25 PPTPHPATDPPPISPQNPTPPPPPLPASAAAPTTPSPNHS--GDPSRPIPSQAPAPPPPP 82
Query: 751 AXNXXAPXXH 780
+ P H
Sbjct: 83 TADPSPPLPH 92
Score = 24.2 bits (50), Expect(2) = 1.7
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP 1002
P P P PP P + P PA + GEP
Sbjct: 107 PAPDQPAPPSPPPSLPPSPPAPGSPESMLEREASEADGEP 146
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 30.7 bits (66), Expect = 2.2
Identities = 33/119 (27%), Positives = 33/119 (27%), Gaps = 2/119 (1%)
Frame = +1
Query: 586 PXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKPAXNXX 765
P PP P P G P PQ AP P R R P
Sbjct: 55 PVVCTPPSPPPPFRQKVPVATYSPSSQGQP-PQQQMHPAPT---PVRRRRSCDAPRSPTI 110
Query: 766 APXXHAHXXXXXXXXXXXTXAAXLXXLXXXXXX--ANTTXXPXPKXPPPPGPXXAXHPR 936
AP H A L L A TT P P PPPP P A R
Sbjct: 111 APE-HRRASCDSPRPTPPAIVARLMGLEESAPPSPAATTPRPLPTRPPPPPPETAAEKR 168
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 5.2
Identities = 26/125 (20%), Positives = 30/125 (24%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P P RPP + P P P P P P P PKP
Sbjct: 188 PSPPPPPPTRPPS---VKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKP 244
Query: 751 AXNXXAPXXHAHXXXXXXXXXXXTXAAXLXXLXXXXXXANTTXXPXPKXPPPPGPXXAXH 930
P + L P P P PP P
Sbjct: 245 QPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPP 304
Query: 931 PRGPA 945
P+ P+
Sbjct: 305 PQQPS 309
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 1001 GSPXXPRGXPPXTXXAPXXAGPRGXXAXXGPGGGG 897
GS RG PP + G G A PGGGG
Sbjct: 102 GSIHTQRGSPPLPPRSGQRGGEEGEVAAAAPGGGG 136
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEPVP 1008
P PK PPPP P P P G P G G P P
Sbjct: 339 PPPKGPPPPPPAKGP-PPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 26.2 bits (55), Expect(2) = 5.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGA 957
P P PPPPG P P GA
Sbjct: 362 PSPPPPPPPGGKKGGPPPPPPKGGA 386
Score = 21.4 bits (43), Expect(2) = 5.7
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 613 AXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKPAXNXXAP 771
A P P P AP P AP PP P PA P
Sbjct: 306 AAVASPAPPPPPPPKPAAAAPPPPPPPKAAPP--PPPPKGPPPPPPAKGPPPP 356
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 24.6 bits (51), Expect(2) = 5.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 868 NTTXXPXPKXPPPPGPXXAXHPRGP 942
N++ P P PPP P A P P
Sbjct: 102 NSSQPPPPPPPPPSPPPSAPPPPPP 126
Score = 23.0 bits (47), Expect(2) = 5.8
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +1
Query: 580 PXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P G PP P P P P P P PP + P P
Sbjct: 56 PPPPPGPPP----PHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108
>07_03_1573 + 27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +1
Query: 868 NTTXXPXP---KXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLG-XXGEPVP 1008
N T P P + PPPP P P+ P+ G P G G P P
Sbjct: 33 NPTPPPPPPRRRTPPPPPPGSGPGPQRPSYLSVALRRRGPPAGSAAGTPAP 83
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 25.4 bits (53), Expect(2) = 7.0
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 622 EXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP-AXNXXAP 771
+ P P P GG P P P PP R P P A AP
Sbjct: 1134 QAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAP 1184
Score = 21.8 bits (44), Expect(2) = 7.0
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP 1002
P PPP G P P A + G P G P
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P P P G PP + + P P P P P P PP P+P
Sbjct: 1138 PPPPLPE-GPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
Query: 751 A 753
A
Sbjct: 1197 A 1197
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 865 ANTTXXPXPKXPP--PPGPXXAXHPRGPAXXG 954
AN P P PP PP P HP GP G
Sbjct: 1151 ANQMPLPPPPPPPLPPPPPVAPFHPPGPHFSG 1182
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEPVP 1008
P PPPP A P GP G G G G P P
Sbjct: 349 PPPPPPPAAPAAPRPPGPG-PGPPPPPGAAGRGGGGPPPP 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.148 0.523
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,895,399
Number of Sequences: 37544
Number of extensions: 238538
Number of successful extensions: 1512
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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