Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_M14
(1138 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 3.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 25 3.9
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 4.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 25 7.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 8.1
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP-VPXHSXREGXXXRXXXPAX 1059
P P P P GP A P GPA G P G G+P P + G P
Sbjct: 142 PPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAP-GQDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 1060 XAXP 1071
P
Sbjct: 201 PGQP 204
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP-VPXHSXREGXXXRXXXPAX 1059
P P P P GP A P GPA G P G G+P P + G P
Sbjct: 142 PPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAP-GNDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 1060 XAXP 1071
P
Sbjct: 201 PGQP 204
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP-VPXHSXREGXXXRXXXPAX 1059
P P P P GP A P GPA G P G G+P P + G P
Sbjct: 142 PPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAP-GNDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 1060 XAXP 1071
P
Sbjct: 201 PGQP 204
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP-VPXHSXREGXXXRXXXPAX 1059
P P P P GP A P GPA G P G G+P P + G P
Sbjct: 142 PPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAP-GNDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 1060 XAXP 1071
P
Sbjct: 201 PGQP 204
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP-VPXHSXREGXXXRXXXPAX 1059
P P P P GP A P GPA G P G G+P P + G P
Sbjct: 142 PPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAP-GNDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 1060 XAXP 1071
P
Sbjct: 201 PGQP 204
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein
H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRGPA-XXGAXXVXG-GXPLGXXGEPVPXHSXREGXXXRXXXPAXX 1062
P P PPGP P GPA GA G P G P P G P
Sbjct: 181 PAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPD 240
Query: 1063 AXPAXXXXGRAGXWAP 1110
G AG P
Sbjct: 241 GASPTAAPGAAGPPGP 256
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRGPA-XXGAXXVXG-GXPLGXXGEPVPXHSXREGXXXRXXXPAXX 1062
P P PPGP P GPA GA G P G P P G P
Sbjct: 180 PAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPD 239
Query: 1063 AXPAXXXXGRAGXWAP 1110
G AG P
Sbjct: 240 GASPTAAPGAAGPPGP 255
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical protein
Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRG-PAXXGAXXVXG--GXPLGXXGEP-VPXHSXREGXXXRXXXPA 1056
P P PPGP +G P G+ + G G P G GEP P ++G + P
Sbjct: 202 PAVPGPPGPPGQAGQQGPPGPPGSNGIDGAPGAP-GAKGEPGTPGEPGKDGEPGKPGTPG 260
Query: 1057 XXAXP 1071
P
Sbjct: 261 QDGTP 265
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical protein
F57B1.4 protein.
Length = 317
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 883 PXPKXPP-PPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP 1002
P P PP PPGP A P P G+ G P G G P
Sbjct: 243 PGPAGPPGPPGPAGA--PGQPGQSGSAQPGGPGPQGDAGAP 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 1007 GTGSPXXPRGXPPXTXXAPXXAGPRGXXAXXGPGGGGXFG 888
GT P P G PP AP G G GPG G G
Sbjct: 241 GTPGPAGPPG-PPGPAGAPGQPGQSGSAQPGGPGPQGDAG 279
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical protein
F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 883 PXPKXPP-PPGPXXAXHPRGPAXXGAXXVXGGXPLGXXGEP 1002
P P PP PPGP A P P G+ G P G G P
Sbjct: 239 PGPAGPPGPPGPAGA--PGQPGQSGSGQPGGPGPQGDAGAP 277
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 1007 GTGSPXXPRGXPPXTXXAPXXAGPRGXXAXXGPGGGGXFG 888
GT P P G PP AP G G GPG G G
Sbjct: 237 GTPGPAGPPG-PPGPAGAPGQPGQSGSGQPGGPGPQGDAG 275
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPK 747
P P P G PP P P P GG P P P PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 748 P 750
P
Sbjct: 786 P 786
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +1
Query: 580 PXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKPAX 756
P P G PP P P P GG P P P PP P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPP 765
Query: 757 NXXAP 771
P
Sbjct: 766 GGCPP 770
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGP 942
P P PPPPG P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPK 747
P P P G PP P P P GG P P P PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 748 P 750
P
Sbjct: 786 P 786
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +1
Query: 580 PXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKPAX 756
P P G PP P P P GG P P P PP P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPP 765
Query: 757 NXXAP 771
P
Sbjct: 766 GGCPP 770
Score = 23.4 bits (48), Expect(2) = 8.2
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGP 942
P P PPPPG P P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +1
Query: 571 PRXPXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPK 747
P P P G PP P P P GG P P P PP P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 748 P 750
P
Sbjct: 369 P 369
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +1
Query: 580 PXPXXGRPPXXAXAEXPDXP-XXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKPAX 756
P P G PP P P P GG P P P PP P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-------PGGLPPISGGPPPPPPPP 348
Query: 757 NXXAP 771
P
Sbjct: 349 GGCPP 353
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 883 PXPKXPPPPGPXXAXHPRGP 942
P P PPPPG P P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPP 371
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 25.4 bits (53), Expect(2) = 3.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 865 ANTTXXPXPKXPPPPGP 915
AN T P P PPPP P
Sbjct: 553 ANGTNVPIPPPPPPPLP 569
Score = 22.6 bits (46), Expect(2) = 3.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 889 PKXPPPPGPXXAXHPRGPAXXG 954
P PPPP P P P G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPG 597
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 1028 PSRXLXWGTGSPXXPRGXPPXTXXAPXXAGPRGXXAXXGPGGG 900
P R G G P G P A A P A G GGG
Sbjct: 275 PPRSAALGAGGGAEPAGAAPEAAAAAPEAAPEAAPAAEGAGGG 317
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 898 PPPPGPXXAXHPRGPA-XXGAXXVXGG-XPLGXXGEPVP 1008
P PPGP P GPA GA G P G G P P
Sbjct: 143 PGPPGPEGPAGPAGPAGNAGADGEAGAEGPAGEAGPPGP 181
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +1
Query: 889 PKXPP-PPGPXXAXHPRGPAXXGAXXVXGGXP--LGXXGEPVP 1008
P PP PPGP + P GPA G P G G P P
Sbjct: 102 PAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGP 144
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +1
Query: 889 PKXPP-PPGPXXAXHPRGPAXXGAXXVXGGXP--LGXXGEPVP 1008
P PP PPGP + P GPA G P G G P P
Sbjct: 102 PAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGP 144
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +1
Query: 571 PRXPXPXXGR---PPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPP 720
P P P GR PP P P PG G P P + P PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +1
Query: 571 PRXPXPXXGR---PPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPP 720
P P P GR PP P P PG G P P + P PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 25.4 bits (53), Expect(2) = 7.2
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = +1
Query: 883 PXPKXPP----PPG-PXXAXHPRGPAXXGAXXVXGGXPLGXXGEPVP 1008
P P PP PPG P GP GA G G G P P
Sbjct: 197 PGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGP 243
Score = 21.8 bits (44), Expect(2) = 7.2
Identities = 16/60 (26%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Frame = +1
Query: 595 GRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXR-XRAXXPKPAXNXXAP 771
G P P P P PG GA P PP + A P P P
Sbjct: 120 GPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTP 179
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +1
Query: 586 PXXGRPPXXAXAEXPDXPXXPXXPGGXGAPXPQXXXLXAPXXRPPXRXRAXXPKP 750
P PP + D P PG G P P P PP R P P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPG-PPTRRPPGPPGP 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.148 0.523
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,307,676
Number of Sequences: 27780
Number of extensions: 153465
Number of successful extensions: 2339
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3078165110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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