Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M12
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 796  YRSPQPNDRAQRVSERGXRKSAQYANRLSPRVG 698
            Y  PQP +  Q  ++   +  +Q AN+  P  G
Sbjct: 997  YTPPQPANAQQGQAQAQAKPQSQEANKPKPATG 1029


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/64 (18%), Positives = 27/64 (42%)
 Frame = +3

Query: 579 IALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYWALFRXPRSL 758
           +  + +I+    QVN   C ++     GE++ +++     P  G +    W +    R  
Sbjct: 24  LIFYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYNPRYPLPYSGSK--CTWTITSYHRIN 81

Query: 759 TRCA 770
            +C+
Sbjct: 82  LKCS 85


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 707 RGEAVCVLGALPXSSLTD 760
           +GE V +L ALP SS+ +
Sbjct: 519 KGETVGLLNALPPSSMKE 536


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 44  KXLVIFFISLSDCQGVTR*XRVPQA 118
           + L++FF+ LS C   +R   VP +
Sbjct: 4   RILLLFFLLLSSCTRPSRGNAVPSS 28


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 44  KXLVIFFISLSDCQGVTR*XRVPQA 118
           + L++FF+ LS C   +R   VP +
Sbjct: 4   RILLLFFLLLSSCTRPSRGNAVPSS 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,353
Number of Sequences: 438
Number of extensions: 3913
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)