Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_M10
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    27   0.31 
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    27   0.31 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    27   0.31 
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    26   0.41 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.95 
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    24   1.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.8  

>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 319 SQRQREELNKAIADYLGSNGYNDALEAF 402
           S+ + EE+ K ++ Y+   GYN A  AF
Sbjct: 90  SETRFEEIKKEVSSYIKKIGYNPAAVAF 117


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 319 SQRQREELNKAIADYLGSNGYNDALEAF 402
           S+ + EE+ K ++ Y+   GYN A  AF
Sbjct: 106 SETRFEEIKKEVSSYIKKIGYNPAAVAF 133


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 319 SQRQREELNKAIADYLGSNGYNDALEAF 402
           S+ + EE+ K ++ Y+   GYN A  AF
Sbjct: 163 SETRFEEIKKEVSSYIKKIGYNPAAVAF 190


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 319 SQRQREELNKAIADYLGSNGYNDALEAF 402
           S+ + EE+ K ++ Y+   GYN A  AF
Sbjct: 163 SEARFEEIKKEVSSYIKKIGYNTASVAF 190


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +1

Query: 295 PTTMKMVLSQRQREELNKAIADYLGSNGYNDALEAFKKEADMTGEMDRKFGGLLEKKWTS 474
           P   K + S    E   +A+ + LG +G N+  ++ +    +  E+D K GG+  K    
Sbjct: 455 PAVTKSLASLTDAENSRRAMEN-LG-DGRNNKEDSEEFRQRLRKELDSKTGGVNLKGHAH 512

Query: 475 VIRLQKKVMELESKLSEAQKEF 540
            + L  K  ++ES    A++ F
Sbjct: 513 WLTLHFKDPKVESAFHNAEEAF 534


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 182 LLLHYSLILFNLTHTVNA 129
           +L+ Y+LILFN+ H  +A
Sbjct: 26  ILISYALILFNILHMSSA 43


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 442 FGGLLEKKWTSVIRLQKKVMELESKLSEAQK 534
           +GG   K   + ++  KK+ ELE ++   QK
Sbjct: 267 YGGRNRKICEAFVKTGKKISELEKEMLNGQK 297


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 414 RHDRRDGSQVRWPLGEEMDLRHQTSEKGYGTGI*IVGGSEG 536
           ++D +   +V  P G+  D+     EKG  TG  +  GS+G
Sbjct: 429 QYDLKKNLKVCLPPGQYCDVISGNLEKGRCTGKIVTVGSDG 469


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 489 LKSDDGGPFLLQEATE 442
           ++SDDGGP  L+   E
Sbjct: 440 MQSDDGGPLSLKNKVE 455


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 326 RCDNTIFIVVG*CLRRLAREVHCSRVLL 243
           RC    F +   C+ R++  +  +RVLL
Sbjct: 20  RCSRDWFRISAGCVSRISNRISRNRVLL 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,971
Number of Sequences: 438
Number of extensions: 3860
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)