Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_M08
(955 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 7e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.045
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 31 0.32
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.73
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.73
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.1
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 7e-04
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 698 PPPXXXXXXXXXXXXXXPXPXPXPGXPGPXSPPXRGXGAXPPXPPP 835
PPP P P P G P P PP GA PP PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.7 bits (71), Expect = 0.078
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +1
Query: 790 PPPPGXRXXSPXAPPXXGPPXXX--GXPAPPPXGGGXXXPPRXXPXXXPLXRPPPP 951
PPPP +P P PP G P PPP PP P PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-------PPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.10
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = +3
Query: 819 PXXPP----PXXAPPXXGXARPPPXRGGX--XXPPPGXPXXXPPXPAPXP 950
P PP P AP P P GG PPPG PP P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.97
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 775 PXPXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPP 879
P P PPP P PP G P PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 828 PPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPA 941
P P AP G PPP G PP P PP PA
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPPA 784
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 828 PPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAPXP 950
PPP PP A PPP PPP AP P
Sbjct: 761 PPPPPPPPGVAGAGPPP----PPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 775 PXPXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPP 879
P P +PPP P PP G P PPP
Sbjct: 748 PIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 371 PXLYXXAPPPGXXGXLLGXPPXPPPGXPRXPA 466
P + PPP G PP PPP P A
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 781 PXLPPPPGXRXXSPXAPPXXGPPXXXG 861
P PPPPG P PP P G
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.045
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +1
Query: 769 RXPXPXLPPPPGXRXXSPXAPPXXGPPXXX-GXPAPPPXGGGXXXPPRXXPXXXPLXRPP 945
R P +P PP +P + P PP G PA PP P P P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPL 469
Query: 946 PP 951
PP
Sbjct: 470 PP 471
Score = 29.9 bits (64), Expect = 0.55
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 766 PRXPXPXLPP--PPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXR 939
P P LPP PP +P APP PP APP G PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPL--PPS--APIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 940 PPP 948
P P
Sbjct: 480 PAP 482
Score = 29.1 bits (62), Expect = 0.97
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 749 PXPXPXPGXPGPXSPPXRGXGAXPPXPPPXXXXXXXXXXXXXXXXGGGXPXPPGXPXPGA 928
P P P P PP G G+ PP G PP P A
Sbjct: 311 PPPPPPPSRRNRGKPPI-GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 929 PFXGPXPP 952
P G PP
Sbjct: 370 PSTGRQPP 377
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 790 PPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPPPP 951
PPPP R P G P PPP P PPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 793 PPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXP-LXRPPPP 951
PP G + PP PP + P G PP P P R PPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 790 PPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPPPP 951
PPPP + PP P PPP P PPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 828 PPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
PPP + P G PP PP P P AP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 816 LPXXPPPXXAPPXXGXARPPPXRGGXXXPP-PGXPXXXPPXPAPXP 950
LP P P PP G PP P PP PAP P
Sbjct: 439 LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/67 (26%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Frame = +2
Query: 749 PXPXPXPGXPGPXSPPXRGXGAXPPXPPPXXXXXXXXXXXXXXXXGGGXP--XPPGXPXP 922
P P P G P +G A PP PP P PP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 923 GAPFXGP 943
AP P
Sbjct: 399 SAPALPP 405
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 781 PXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXP 930
P PPP +P PP P P P PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +1
Query: 781 PXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPPPP 951
P PP S APP PP +PP P P +PP P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLP 293
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +1
Query: 790 PPPPGXRXXSPXAPPXXGPPXXXGXPAPPP----XGGGXXXPPRXXPXXXPLXRPPPP 951
PPPP R + + P PP P PPP G PP PPP
Sbjct: 338 PPPPPPRSNAAGSIPL--PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 816 LPXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
LP PPP + PP R PPP P P
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAPXPL 953
P P P PP + PP P P P P PL
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +2
Query: 755 PXPXPGXPGPXSPPXRGXGAXPPXPPPXXXXXXXXXXXXXXXXGGGXPXPPGXP-XPGAP 931
P P P P +PP + PP PP P P G P P P
Sbjct: 416 PVPTPPSLPPSAPP-----SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 932 FXGPXPP 952
P PP
Sbjct: 471 PAAPAPP 477
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAPXP 950
P P APP PPP PP P P AP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = +1
Query: 799 PGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXP-XXXPLXRPPPP 951
P +P P P P PPP PP P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 766 PRXPXPXLPPPPGXRXXSPXAPP-XXGPPXXXGXPAP 873
P+ P PPPP P APP GPP P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
P PPP + P A P P PPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 775 PXPXLPPPPGXRXXSPXAPPXXGPPXXXGXPAP 873
P P PPP P PP PP AP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 668 GGXXPAGXXXPPPXXXXXXXXXXXXXX-PXPXPXPGXPGPXSPP-XRGXGAXPPXPPP 835
GG PA PP P P P P P +PP G + PP P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.8
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +1
Query: 781 PXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPP 945
P PP +P PP PP P+ PP G PP P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPP----PPSAPPMPAG---PPSAPPPPLPASSAP 1741
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 949 GXGAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXGGGXXGXXXXPPXGGG 788
G G G G PGG P GGG G GGG G P GG
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -3
Query: 950 GGGGRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGAXGEXXRXPGGGGRXGXG 774
GG G G G G GG G P GG G G G GG G G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.9 bits (64), Expect = 0.55
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = -1
Query: 949 GXGAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXGGGXXGXXXXPPXGGGG 785
G G G GG G PGG G G GG GGG G P GGG
Sbjct: 192 GFGGGSGGPPPG-PGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGPGGFGGG 243
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 10/62 (16%)
Frame = -3
Query: 929 GXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXX--------GGAXGEXXRXPG--GGGRXG 780
G G GG PPP GG G GG GG G PG GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 779 XG 774
G
Sbjct: 247 FG 248
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 943 GAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXGGGXXGXXXXPPXGGGG 785
G G G G GG P GG G GGG G P GGG
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -3
Query: 521 GGTGXPPXGGXE--PXXAGGXPGXAGPRXGXREGAPKXNRXSPGG 393
GG G P GG E P GG PG G G G P PGG
Sbjct: 224 GGFGGGP-GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = -3
Query: 941 GRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGAXGEXXRXPGG--GGRXGXG 774
G G G G PP GG G G G G PGG GG G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 878 GGGAGXPXXXGGPXXGGAXGEXXRXPGGGGRXGXGXRG 765
GG G P GG G G GG G G G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 30.7 bits (66), Expect = 0.32
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +1
Query: 787 LPPPPGXRXXSPXAPPXXG-PPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPPPP 951
LPPPP + AP PP G PP G PP P P P
Sbjct: 907 LPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAP 962
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 949 GXGAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXGGGXXGXXXXPPXGGGG 785
G G+GG G G G GGGR GG GG G G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGG-ARGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 949 GXGAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXG-GGXXG 818
G G G+GG G GG R G G A GG+ G GG G
Sbjct: 27 GFGGGRGGARGGGRGGARGG--RGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = -3
Query: 953 QGGGGRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGAXGEXXRXPGGGGRXG-X 777
+GG G RG G GG G G G GG G G R GGR G
Sbjct: 8 RGGRGGSRG-GRGGFNGGR-----GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSS 61
Query: 776 GXRG 765
G RG
Sbjct: 62 GGRG 65
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 950 GGGGRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGA 825
GG G RG G RGG GG G G GGA
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Score = 26.2 bits (55), Expect = 6.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -1
Query: 952 RGXGAGKGGXXXGXPGGGXXXPPRXGGGRAXPXXGGAXXGGGXXGXXXXPPXGGGGR 782
RG G G G GG GG R G GG G GGR
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 953 QGGGGRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGAXG 819
+GG G RG G RGG GGA GGA G
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +3
Query: 816 LPXXPPPXXAPPXXGXAR-PPPXRGGXXXPP-PGXPXXXPPXPAP 944
+P P P APP + PP + PP P PP PAP
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 29.5 bits (63), Expect = 0.73
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 819 PXXPPPXXAPPXX--GXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
P P P PP A PP + PP P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 816 LPXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
+P PPP APP P P G PPP PP P P
Sbjct: 1188 VPPVPPPSEAPPV-----PKPSVGVPPVPPPS---TAPPVPTP 1222
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +3
Query: 816 LPXXPPPXXAPPXX--GXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
+P P P APP A PP P P PP PAP
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 819 PXXPPPXXAPPXX--GXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
P P P APP A PP P P PP PAP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +3
Query: 816 LPXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
+P PPP APP P P G P P PP PAP
Sbjct: 1207 VPPVPPPSTAPPV-----PTPSAG--LPPVPVPTAKAPPVPAP 1242
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 766 PRXPXPXLPPP-PGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPR-XXPXXXPLXR 939
P P P PP P +P APP P P P G P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 940 PPP 948
PP
Sbjct: 1101 APP 1103
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 766 PRXPXPX-LPPPPGXRXXSPXAP-PXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXR 939
P P P PP P +P P P PP A PP PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 940 PPP 948
P P
Sbjct: 1172 PAP 1174
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +1
Query: 766 PRXPXPX-LPPPPGXRXXSPXAP-PXXGPPXXX-GXPAPPPXGGGXXXPPRXXPXXXPLX 936
P P P PP P +P P P PP APP PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 937 RPPP 948
PPP
Sbjct: 1191 VPPP 1194
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
P PPP AP + P P PP P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAP----SGAPPVPAPSGIPPVPKP 1097
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +1
Query: 766 PRXPXPXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPP--RXXPXXXPLXR 939
P P P + PP +P P P P P P G P P P
Sbjct: 1102 PPVPKPSVAVPP---VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Query: 940 PPPP 951
PP P
Sbjct: 1159 PPVP 1162
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXAR--PPPXRGGXXXPPPGXPXXXPPXPAP 944
P P APP + PP + PP P PP P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 819 PXXPPPXXA-PPXXGXARPPPX-RGGXXXPPPGXPXXXPPXPAP 944
P P P A PP + PP + PP P PP P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPP--GXPXXXPPXPAP 944
P PP P P P G P P G P PP AP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 819 PXXPPPXXAPPXXGXARPPPXRGGXXXPPPGXPXXXPPXPAP 944
P P P APP PP G P PP PAP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPP----VPKSSSGAPSAPPPVPAP 1069
Score = 25.8 bits (54), Expect = 9.0
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +1
Query: 766 PRXPXPX-LPPPPGXRXXSPXAP-PXXG-PPXXXGXPAPPPXGGGXXXPPRXXPXXXPLX 936
P P P PP P +P P P G PP PP PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 937 RPPP 948
PPP
Sbjct: 1210 VPPP 1213
Score = 25.8 bits (54), Expect = 9.0
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +1
Query: 775 PXPXLPPPPGXRXXSPXAPPXXG-PPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXRPPP 948
P +PP P P P G PP APP PP P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.73
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = -3
Query: 953 QGGGGRXRGXXXGXXRGGXXXPPPXGGGAGXPXXXGGPXXGGAXGEXXRXPGGGGR 786
+GG G RG G RGG G G G GG GG+ G GG R
Sbjct: 137 RGGRGGFRGGRGGS-RGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFR 191
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = -1
Query: 937 GKGGXXXGXPG--GGXXXPPRXG-GGRAXPXXGGAXXGGGXXGXXXXPPXGGGGR 782
G+GG G G GG R G GG + GG GG G G GR
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 828 PPPXXAPPXX-GXARPPPXRGGXXXPPPGXPXXXPPXPAPXP 950
PP APP RPP PP P PP P+ P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP 165
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Frame = +1
Query: 775 PXPXLPPP-----PGXRXXSPXAPPXXGPPXXXGXPAPPPXGGGXXXPPRXXPXXXPLXR 939
P P +PPP P +P P PP P P P P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL--PSAVPPMPPKVP 202
Query: 940 PPP 948
PPP
Sbjct: 203 PPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 775 PXPXLPPPPGXRXXSPXAPPXXGPPXXXGXPAPPP 879
P + PPP + S AP P P PPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 808 RXXSPXAPPXXGPPXXXGXPAPPP 879
R SP PP P PAPPP
Sbjct: 217 RAVSPEIPPTYTPKQADPLPAPPP 240
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 453 GXPGGGXGGXPKXXPXXPGGGA 388
G PGG GG P P GGA
Sbjct: 613 GAPGGAPGGMPGGAPGGAPGGA 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,981,058
Number of Sequences: 5004
Number of extensions: 29054
Number of successful extensions: 341
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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