Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_L17
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   196   2e-50
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   0.85 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.6  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  196 bits (478), Expect = 2e-50
 Identities = 102/209 (48%), Positives = 130/209 (62%), Gaps = 4/209 (1%)
 Frame = +2

Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
           VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
           AY+TG                          +YNVE  +     F+  LD+GLARTTTG+
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156

Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHR----GSHLWFACC*IHEKS*T 748
           ++F  MKG  DGG+NVPHS  RF G+D ESK++NAE HR    G H+      + E+   
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDED 216

Query: 749 G**XFFQETISKYIKLXVTADAIEAIYXK 835
                ++   SK++   + AD + A Y K
Sbjct: 217 R----YKRQFSKFLAAGLNADNLVATYQK 241



 Score = 32.7 bits (71), Expect = 0.37
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +1

Query: 112 GFVKVVXHXXXXXXXXXXXXXXXEGKTDYYARKRL 216
           G VKV+ +               EGKTDYYARKRL
Sbjct: 2   GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = -2

Query: 286 IFVGETHNQTIFRCVIFVLVLNXRGVYEHNNQFSLHDAX*ILLGTA*SIVCAXQL*RSPX 107
           +FV +TH++  F   I +L +  R +Y  N + + H+     L       C   +  S  
Sbjct: 682 LFVFQTHDEMEFNEEIVILHVLQRELYRKNTKHACHECGNSKLKLKACEECYDAVYCSKE 741

Query: 106 FK-AKXQSGVHRRTPSKKERQKXXGXPVVV 20
            + A   +G HR   SK++  +  G P++V
Sbjct: 742 CQVANWSTGGHREECSKRKPSETVGHPLIV 771


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 500 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 676
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 677 F 679
           F
Sbjct: 128 F 128


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 344  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 231
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 344  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 231
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 239 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 358
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,469,749
Number of Sequences: 27780
Number of extensions: 363062
Number of successful extensions: 878
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)