Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_L12
(988 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.015
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.020
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.047
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.19
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 30 0.44
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.58
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.3
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 28 1.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.3
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 28 2.3
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 5.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.4
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.7 bits (91), Expect = 3e-04
Identities = 31/88 (35%), Positives = 31/88 (35%), Gaps = 1/88 (1%)
Frame = -1
Query: 739 GGGGXXGXXXXXXGXFXGXGAXXGAXGKKGXXRGXXPVXGGPXXPXSG-GGAXGXPRXXG 563
G GG G G F G G G G G GGP G GG G P G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG---GGPGGFEGGPGGFGGGP---G 245
Query: 562 GXRAXWGGXGXGPXXENPXPXGGGGWXW 479
G GG G GP P G GG W
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 36.7 bits (81), Expect = 0.005
Identities = 27/81 (33%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Frame = -2
Query: 825 GXGXGXXXAPGGGPPXXPXGGXFFGXXXGGGGGXXGXXXXXXGPXXGXGXXXG-PXXKRX 649
G G G GGPP P G FG G G G GP G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 648 XXGGXPRXGGDPXPPXXGGGP 586
GG GG P GGGP
Sbjct: 247 FGGGLGGFGGGPG--GFGGGP 265
Score = 31.9 bits (69), Expect = 0.14
Identities = 28/88 (31%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = -2
Query: 951 GXXXGGXXEGGPXPPXGEXGXRXXXXXXXXXXXXXXXXGXXGGXGXGXXXAPGG--GPPX 778
G GG G PP G G G GG G G PGG G P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG-GFEGGPGGFGGGPG 245
Query: 777 XPXGGXFFGXXXGGGGGXXGXXXXXXGP 694
GG G GG GG G GP
Sbjct: 246 GFGGG--LGGFGGGPGGFGGGPGGHGGP 271
Score = 31.1 bits (67), Expect = 0.25
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -2
Query: 828 GGXGX--GXXXAPGGGPPXXPXG-GXFFGXXXGGGGGXXGXXXXXXGPXXGXGXXXGP 664
GG G G GGGP G G F G G GGG G G G G GP
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = -1
Query: 598 GGGAXGXPRXXGGXRAXWGGXGXGPXXENPXPXGGGGWXWKXXXXPXXPGPGEXXGXKXG 419
GGG+ G P GG G G G GGG ++ GPG G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = -1
Query: 694 FXGXGAXXGAXGKKGXXRGXXPVXGGPXXPXSGGGAXGXPRXXGGXRAXWGGXGX---GP 524
F G G G G G P GP GG G GG GG G GP
Sbjct: 180 FHHRGHNGGGFGGFGGGSGGPPP--GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP 237
Query: 523 XXENPXPXGGGG 488
P G GG
Sbjct: 238 GGFGGGPGGFGG 249
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 42/176 (23%), Positives = 47/176 (26%), Gaps = 5/176 (2%)
Frame = +3
Query: 228 KXXPXPXXPPXXGGXRPPXXXTXCVXXXPPPFSRXXKTAXXXGKRGAXXRFGXPXSGXXX 407
K P P P +PP PPP A R P
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP---- 364
Query: 408 XXXPPXFXPLXSPGPGXXGXXFXFQXHP-PPPXGXGFSXXG--PXPXPPQXALXP-PXXR 575
PP P P P PPP G S P + + P P
Sbjct: 365 ---PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 576 GXPXAPPPEXGXXGPPXTGXX-PRXXPFXPXAPXXAPXPXKXPXSXSXXPXXPPPP 740
P + PP PP P P P AP P P P + P P PP
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 33.5 bits (73), Expect = 0.047
Identities = 38/164 (23%), Positives = 41/164 (25%), Gaps = 1/164 (0%)
Frame = +3
Query: 489 PPPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXP-RXXPFXPX 665
PPPP + G P PPQ PP P P G PP + P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP---PPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Query: 666 APXXAPXPXKXPXSXSXXPXXPPPPXXXXQKXXPXGGXXGXPPRGXXXXPXRXXXXXXXX 845
A P P + PP P P PP P
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTPPS---LPPSAPPSLPPSAPPSLPM--------- 441
Query: 846 XXXXXXXXXXXXXXGPPFPPXGGXXPPXXPPPXGFXXPGXAPPP 977
P PP P P P P AP P
Sbjct: 442 ---GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 33.5 bits (73), Expect = 0.047
Identities = 34/155 (21%), Positives = 37/155 (23%)
Frame = +1
Query: 277 PPKXEXXVXXXXPPPFRGXXKPPXFXXKGAPXXVLGPPVQXXGXXXXPXPSXXFXPPGRG 456
PP P P +G PP + AP PP P+ PGR
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Query: 457 GXGTXFXSKXTPPPPRXXGFRXXXXXXXXXXXXSXPPXXGGXXXPPPXXGGXGVPPXPGX 636
PP S PP P G PP P
Sbjct: 400 APAL-------PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 637 XPGXXPFXXXPPPXPPPPXRXPXXXXXXXXXPPPP 741
P P P PP P P P P
Sbjct: 453 APIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.082
Identities = 38/168 (22%), Positives = 40/168 (23%), Gaps = 5/168 (2%)
Frame = +3
Query: 489 PPPPXGXGFSXXGPXPXPPQXALXPPXXRGX--PXAPPPEXGXXGPPXTGXXPRXXPFXP 662
PPP G S P P P P PPP R P P
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 663 XA-PXXAPXPXKXPXSXSXXPXXPPPPXXXXQKXXPXGGXXGXPPRGXXXXPXRXXXXXX 839
+ P S S P PPPP G PP+G P
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSN------AAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 840 XXXXXXXXXXXXXXXXGPPFPPXG--GXXPPXXPPPXGFXXPGXAPPP 977
PP PP G P PP P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/87 (25%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Frame = +2
Query: 728 PPPPPXXXPKXXPPXGXXGGPPPGAXXXPXPXPPXXXXXXXXXXXXXXXXXXXRXPXS-P 904
PPPPP + PP G G + P P P P S P
Sbjct: 313 PPPPPSRRNRGKPPIG--NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 905 XGGXGPPSXXPPXXXPXPXGGPPPXGG 985
G PP P PP G
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +2
Query: 686 PXKGPXXXXXXPXXPPPPPXXXPKXXPPXGXXGGPP-PGAXXXPXPXP 826
P P P PP PP P G PP P A P P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.1 bits (57), Expect = 4.1
Identities = 42/189 (22%), Positives = 43/189 (22%), Gaps = 2/189 (1%)
Frame = +2
Query: 416 PPXLPXXXFPRAGXGGXXXSLPXPPPPPXGXGVFXXXXXXXXXXXXXXXXXXXXXXXGPP 595
PP P G G SLP PPPPP G
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 596 PXXXXXXXXXXXXXXXXXXLFXXGPXXXPXPXKGPXXXXXXPXXPPPP--PXXXPKXXPP 769
P + G P G P P PP P P PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAI--PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 770 XGXXGGPPPGAXXXPXPXPPXXXXXXXXXXXXXXXXXXXRXPXSPXGGXGPPSXXPPXXX 949
P GA P P PP P P G P P
Sbjct: 434 SAPPS-LPMGAPAAP-PLPPSAPIA----------------PPLPAGMPAAPPLPPAAPA 475
Query: 950 PXPXGGPPP 976
P P P P
Sbjct: 476 PPPAPAPAP 484
Score = 25.8 bits (54), Expect = 9.4
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 7/58 (12%)
Frame = +1
Query: 589 PPPXXGGXGVPPXPGXXPGXXPFXXXP-------PPXPPPPXRXPXXXXXXXXXPPPP 741
PPP G PP P P P PP PPP R PPP
Sbjct: 257 PPPSNGTVSSPPNSPPRP-IAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.015
Identities = 26/81 (32%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Frame = +3
Query: 528 PXPXPPQXALXPPXXR-GXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAPXXAP--XPXKX 698
P P PQ L PP P PPP P + P P A AP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 699 PXSXSXXPXXPP--PPXXXXQ 755
P S P PP PP Q
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQ 208
Score = 30.7 bits (66), Expect = 0.33
Identities = 23/85 (27%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Frame = +3
Query: 492 PPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAP 671
P P P PP+ ++ PP P P PP P P P AP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP-----SKAPPIPSSLP--PPAQPAAP 180
Query: 672 XXAP--XPXKXPXSXSXXPXXPPPP 740
+P P P PPPP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/84 (23%), Positives = 22/84 (26%)
Frame = +3
Query: 489 PPPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXA 668
PP P P PP + PP P P PP P P P
Sbjct: 144 PPRP---SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 669 PXXAPXPXKXPXSXSXXPXXPPPP 740
P + S P PP
Sbjct: 201 VPPPPLSQAPVANTSSRPSSFAPP 224
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 668 PXXXPXPXKGPXXXXXXPXXPPPPPXXXPKXXPPXGXXGGPPPGAXXXPXPXPP 829
P P P P PP P P P PP A P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS-PPSAPSLPSAVPP 196
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.020
Identities = 40/162 (24%), Positives = 41/162 (25%), Gaps = 6/162 (3%)
Frame = +1
Query: 235 PPNXXPPPSXGXXGPPKXEXXVXXXXPPPFRGXXKPPXFXXKGAPXX----VLGPPVQXX 402
P PP G P P P PP GAP V PPV
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 403 -GXXXXPXPSXXFXP-PGRGGXGTXFXSKXTPPPPRXXGFRXXXXXXXXXXXXSXPPXXG 576
G P PS P P G PP PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 577 GXXXPPPXXGGXGVPPXPGXXPGXXPFXXXPPPXPPPPXRXP 702
P P G VPP P P PP P P + P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGL-PPVPVPTAKAP 1237
Score = 33.9 bits (74), Expect = 0.035
Identities = 39/165 (23%), Positives = 41/165 (24%), Gaps = 4/165 (2%)
Frame = +3
Query: 495 PPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPP-PEXGXXGPPXTGXXPRXXPFXPXAP 671
PP P P A PP + APP P PP P P P
Sbjct: 991 PPSAPLSKPVSTSPAAP-LARVPPVPKLSSKAPPVPLPSADAPPIP--VPSTAPPVPIPT 1047
Query: 672 XXAPXPXKXPXSXSXXPXXPPPPXXXXQKXXPXGGXXGXPPRGXXXXPXRXXXXXXXXXX 851
P P + S P P P P G P G P
Sbjct: 1048 STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Query: 852 XXXXXXXXXXXXGPPFPPXGGXXPPXXPPPXG---FXXPGXAPPP 977
PP P PP P P G P A PP
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPP-VPVPSGAPPVPKPSVAAPP 1151
Score = 33.9 bits (74), Expect = 0.035
Identities = 37/159 (23%), Positives = 39/159 (24%), Gaps = 10/159 (6%)
Frame = +3
Query: 528 PXPXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAPXXAPXPXKXPXS 707
P P P P G P APPP + P P P AP P K +
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP-APSGIPPVPKPSVA 1100
Query: 708 XSXXP----XXPPPPXXXXQKXXPXGGXXGXP---PRGXXXXPXRXXXXXXXXXXXXXXX 866
P PP P P P P G P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 867 XXXXXXXGPPFPPXGGXXPPXXPPPXG---FXXPGXAPP 974
PP P PP P G P APP
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 33.1 bits (72), Expect = 0.062
Identities = 31/125 (24%), Positives = 33/125 (26%), Gaps = 3/125 (2%)
Frame = +1
Query: 376 VLGPPVQXXGXXXXPXPSXXFXPPGRGGXGTXFXSKXTPPPPRXXGFRXXXXXXXXXXXX 555
V PPV P P+ PP S PP P G
Sbjct: 1099 VAAPPVPKPSVAVPPVPAPSGAPP------VPKPSVAAPPVPVPSG-----APPVPKPSV 1147
Query: 556 SXPPXXGGXXXPPPXXGGXGVPPXPGXXPGXXPFXXXP---PPXPPPPXRXPXXXXXXXX 726
+ PP PP PP P G P PP PPP P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 727 XPPPP 741
P PP
Sbjct: 1208 PPVPP 1212
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 495 PPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPPEXGXXGP-PXTGXXPRXXPFXPXAP 671
PP + P P P + P G P PPP P P G P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 672 XXAP 683
AP
Sbjct: 1239 VPAP 1242
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +2
Query: 665 GPXXXPXPXKGPXXXXXXPXXPP--PPPXXXPKXXPPXGXXGGPPPGAXXXPXPXP 826
G P P + P PP PP P P G P P A P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Frame = +3
Query: 534 PXPPQXALXPPXXR---GXPXAPPPEXGXXGP-PXTGXXPRXXP-FXPXAPXXAPXPXKX 698
P P + PP + G P PPP P P G P P P P +
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 699 PXSXSXXPXXPPP 737
P + P P P
Sbjct: 1230 PVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 9.4
Identities = 20/81 (24%), Positives = 21/81 (25%)
Frame = +1
Query: 250 PPPSXGXXGPPKXEXXVXXXXPPPFRGXXKPPXFXXKGAPXXVLGPPVQXXGXXXXPXPS 429
P PS G PK V PP P P PPV P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 430 XXFXPPGRGGXGTXFXSKXTP 492
P + S TP
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTP 1252
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.047
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +1
Query: 589 PPPXXGGXGVP---PXPGXXPGXXPFXXXPPPXPPPPXRXPXXXXXXXXXPPPP 741
PPP VP P P P P PPP PPPP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG---VAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.047
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 891 PPFPPXGGXXPPXXPPPXGFXXPGXAPPP 977
PP P GG PP PPP G G PPP
Sbjct: 753 PPAPIMGGPPPP--PPPPGVAGAGPPPPP 779
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 592 PPXXGGXGVPPXPGXXPGXXPFXXXPPPXPPP 687
PP G PP P PG PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.76
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 668 PXXXPXPXKGPXXXXXXPXXPPPPPXXXPKXXPPXGXXGGPPPGAXXXPXPXPP 829
P P P P PPPPP PP GPPP P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP-------PPGVAGAGPPP-----PPPPPP 783
Score = 29.5 bits (63), Expect = 0.76
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 668 PXXXPXPXKGPXXXXXXPXXPPPPPXXXPKXXPPXGXXGGPPPGA 802
P P P P P PPPPP PP PPP A
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPPA 784
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 8/54 (14%)
Frame = +2
Query: 692 KGPXXXXXXPXXPPPPPXXXPKXXPPXGXXGGPPP--------GAXXXPXPXPP 829
K P P P P P PP GGPPP GA P P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 528 PXPXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAPXXAPXPXKXPXS 707
P P PP + P P PPP GPP P P P P S
Sbjct: 732 PPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 708 XSXXPXXPPPP 740
P P
Sbjct: 791 RYYAPAPQAEP 801
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 489 PPPPXGXGFSXXGPXPXP-PQXALXPPXXRGXPXAPPPE-XGXXGPPXTGXXP 641
PPPP P P P P A P G P PPP GPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA---PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 410 GGPPXLPXXXFPRAGXGGXXXSLPXPPPPPXGXG 511
GGPP P P G G P PPPP G
Sbjct: 759 GGPPPPP----PPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 667 PPPXPPPPXRXPXXXXXXXXXPPPPXXXTKK 759
PP PPPP P PPPP KK
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 31.5 bits (68), Expect = 0.19
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 921 PPXXPPPXGFXXPGXAPPP 977
PP PPP GF P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 29.9 bits (64), Expect = 0.58
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 613 GVPPXPGXXPGXXPFXXXPPPXPPP 687
G PP P PG P PPP PPP
Sbjct: 7 GNPPPPPPPPGFEP-PSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.76
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 719 PXXPPPPPXXXPKXXPPXGXXGGPPPG 799
P PPPP P PP PPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 667 PPPXPPPPXRXPXXXXXXXXXPPPPXXXTKK 759
PPP PPPP P PPPP K+
Sbjct: 9 PPPPPPPPGFEPPSQPPP---PPPPGYVKKR 36
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 891 PPFPPXGGXXPPXXPPP 941
PP PP G PP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPP 26
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 30.3 bits (65), Expect = 0.44
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -1
Query: 694 FXGXGAXXGAXGKKGXXRGXXPVXGGPXXPXSGGGAXGXPRXXGGXRAXWGGXGXGPXXE 515
F G G G G G + GG GGG G G +GG G GP
Sbjct: 133 FAGGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPG------GFANMFGGGGAGPHAR 186
Query: 514 NPXPXGGG 491
P GG
Sbjct: 187 RSHPSFGG 194
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +3
Query: 552 ALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAPXXAPXPXKXPXSXSXXPXXP 731
AL G A P P P P P P P P + P P
Sbjct: 1672 ALAAKLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Query: 732 PPP 740
PPP
Sbjct: 1732 PPP 1734
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 534 PXPPQXALXPPXXRGXPXAPPPEXGXXGPPXTGXXPRXXPFXPXAPXXAPXPXKXP 701
P PQ A P P PPP PP P P P P A P
Sbjct: 1691 PVRPQSAAPPQM--SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 891 PPFPPXGGXXPPXXPP-PXGFXXPGXAPPP 977
PP PP PP PP P G P APPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAG---PPSAPPP 1733
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 480 QXHPPPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPP 599
Q PP P PP + PP G P APPP
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPPPPSA-PPMPAGPPSAPPP 1733
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 652 PFXXXPPPXPPPPXRXPXXXXXXXXXPPPP 741
P PP PPP P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 894 PFPPXGGXXPPXXPPPXGFXXPGXAPPP 977
P PP PP PP P PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 588 APPPEXGXXGPPXTGXXPRXXPFXPXAPXXAPXPXKXPXSXSXXPXXPPP 737
A PP+ PP P P P P P S P P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Frame = +2
Query: 728 PPPPPXXXPKXXPPXG------XXGGPPPGA 802
PPPPP PK PP GPP GA
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGA 1913
Score = 27.9 bits (59), Expect = 2.3
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Frame = +3
Query: 480 QXHPPPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPPEXGXXGP-PXTGXXPR-XXP 653
Q PPPP GP P AL P A G P P TG
Sbjct: 1879 QAAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLS 1938
Query: 654 FXPXAPXXAPXPXKXPXSXSXXPXXP 731
P AP K P + + P
Sbjct: 1939 SMPNAPPSVASNAKLPPASNNRKVDP 1964
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 14 YRWPLYVELLNDFFVIVVVYLF 79
+RW Y+ FF +V+VYLF
Sbjct: 289 WRWTEYITSFMGFFALVIVYLF 310
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 376 VLGPPVQXXGXXXXPXPSXXFXPPGRGGXGTXFXSKXTPPPP 501
V P V P PS F PP T S PPPP
Sbjct: 153 VNAPTVSAPNSMVSPPPS--FQPPSAAAPATSLPSDYNPPPP 192
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 619 PPXPGXXPGXXPFXXXPPPXPPPP 690
PP P PPP PPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 14 YRWPLYVELLNDFFVIVVVYLF 79
+RW Y+ FF +++VYLF
Sbjct: 290 WRWTEYITSFMGFFALIIVYLF 311
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 728 PPPPPXXXPKXXPPXGXXGGPPPG 799
PPP P + PP GG PG
Sbjct: 33 PPPAPSRVQQAPPPTAVQGGSSPG 56
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 9.4
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +1
Query: 589 PP--PXXGGXGVPPXPGXXPGXXPFXXXPPPXPPPPXRXPXXXXXXXXXPPPP 741
PP P G P P PG P PPPP R PPPP
Sbjct: 108 PPKEPALPSRGTPSLPSR-PGSRPSVLNQEQVPPPPVR----PNVMSQMPPPP 155
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.4
Identities = 27/111 (24%), Positives = 29/111 (26%), Gaps = 6/111 (5%)
Frame = +3
Query: 420 PXFXPLXSPGPGXXGXXFXFQXHPPPPXGXGFSXXGPXPXPPQXALXPPXXRGXPXAPPP 599
P P+ SP PG P S P PP A PPP
Sbjct: 878 PSMAPVRSPFPGASSAQ--------PAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPP 929
Query: 600 EXGXXGPPXTGXXPRXXPF------XPXAPXXAPXPXKXPXSXSXXPXXPP 734
+ G P T R P P P P S P PP
Sbjct: 930 KVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPP 980
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,717,867
Number of Sequences: 5004
Number of extensions: 46498
Number of successful extensions: 481
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 509282430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -