Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_L11
(812 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035816-1|AAH35816.1| 370|Homo sapiens SUPT3H protein protein. 63 1e-09
AL360272-3|CAH70848.1| 317|Homo sapiens suppressor of Ty 3 homo... 63 1e-09
AL161905-3|CAI15666.1| 317|Homo sapiens suppressor of Ty 3 homo... 63 1e-09
AL138880-4|CAI14627.1| 317|Homo sapiens suppressor of Ty 3 homo... 63 1e-09
AL096865-3|CAI19927.1| 317|Homo sapiens suppressor of Ty 3 homo... 63 1e-09
AF073930-1|AAC36098.1| 317|Homo sapiens histone acetylase compl... 63 1e-09
AF069734-1|AAC39904.1| 317|Homo sapiens SPT3-like protein protein. 63 1e-09
AF064804-1|AAC70014.1| 399|Homo sapiens transcription factor SU... 60 1e-08
BC050384-1|AAH50384.1| 328|Homo sapiens suppressor of Ty 3 homo... 51 4e-06
AL499610-1|CAH73344.1| 328|Homo sapiens suppressor of Ty 3 homo... 51 4e-06
AL360272-2|CAH70846.1| 328|Homo sapiens suppressor of Ty 3 homo... 51 4e-06
AL161905-2|CAI15664.1| 328|Homo sapiens suppressor of Ty 3 homo... 51 4e-06
AL138880-2|CAI14625.1| 328|Homo sapiens suppressor of Ty 3 homo... 51 4e-06
BC121181-1|AAI21182.1| 124|Homo sapiens TAF13 RNA polymerase II... 41 0.005
X84003-1|CAA58827.1| 124|Homo sapiens PolII transcription facto... 41 0.006
BX679664-8|CAH71330.1| 124|Homo sapiens TAF13 RNA polymerase II... 41 0.006
BC121180-1|AAI21181.1| 124|Homo sapiens TAF13 RNA polymerase II... 41 0.006
>BC035816-1|AAH35816.1| 370|Homo sapiens SUPT3H protein protein.
Length = 370
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 74 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 133
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 134 EDLLFLMRKDKKKLRRLLKY 153
>AL360272-3|CAH70848.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AL161905-3|CAI15666.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AL138880-4|CAI14627.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AL096865-3|CAI19927.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AF073930-1|AAC36098.1| 317|Homo sapiens histone acetylase complex
subunit protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AF069734-1|AAC39904.1| 317|Homo sapiens SPT3-like protein protein.
Length = 317
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD P T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 21 GKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 80
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 81 EDLLFLMRKDKKKLRRLLKY 100
>AF064804-1|AAC70014.1| 399|Homo sapiens transcription factor
SUPT3H protein.
Length = 399
Score = 59.7 bits (138), Expect = 1e-08
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = +2
Query: 218 GEGTNFQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITN 397
G+ +F E+ +MM+ GD + T +LVE++V QL ++LQ+ S LRG++ IT
Sbjct: 103 GKSISFATELQSMMYSLGDARSLFMRTAVLVEDVVHTQLINLLQQAAEVSQLRGARVITP 162
Query: 398 YDIIYTMRNNTVKLKRLHDY 457
D+++ MR + KL+RL Y
Sbjct: 163 EDLLFLMRKDKKKLRRLLKY 182
>BC050384-1|AAH50384.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 260 HGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIYTMRNNTVKL 439
+ GD P T +LVE++V QL ++LQ+ S LRG++ IT D+++ MR + KL
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 440 KRLHDY 457
+RL Y
Sbjct: 106 RRLLKY 111
>AL499610-1|CAH73344.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 260 HGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIYTMRNNTVKL 439
+ GD P T +LVE++V QL ++LQ+ S LRG++ IT D+++ MR + KL
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 440 KRLHDY 457
+RL Y
Sbjct: 106 RRLLKY 111
>AL360272-2|CAH70846.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 260 HGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIYTMRNNTVKL 439
+ GD P T +LVE++V QL ++LQ+ S LRG++ IT D+++ MR + KL
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 440 KRLHDY 457
+RL Y
Sbjct: 106 RRLLKY 111
>AL161905-2|CAI15664.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 260 HGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIYTMRNNTVKL 439
+ GD P T +LVE++V QL ++LQ+ S LRG++ IT D+++ MR + KL
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 440 KRLHDY 457
+RL Y
Sbjct: 106 RRLLKY 111
>AL138880-2|CAI14625.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 260 HGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIYTMRNNTVKL 439
+ GD P T +LVE++V QL ++LQ+ S LRG++ IT D+++ MR + KL
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 440 KRLHDY 457
+RL Y
Sbjct: 106 RRLLKY 111
>BC121181-1|AAI21182.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 18kD
protein.
Length = 124
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/74 (28%), Positives = 43/74 (58%)
Frame = +2
Query: 233 FQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIY 412
F KE+ MM+GFGD+ NP +V ++E++V++ + + + + + +G + DI++
Sbjct: 32 FSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAM-SIGRQGRAQVE--DIVF 88
Query: 413 TMRNNTVKLKRLHD 454
+R + K R+ D
Sbjct: 89 LIRKDPRKFARVKD 102
>X84003-1|CAA58827.1| 124|Homo sapiens PolII transcription factor
TFIID protein.
Length = 124
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/74 (27%), Positives = 42/74 (56%)
Frame = +2
Query: 233 FQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIY 412
F KE+ MM+GFGD+ NP +V ++E++V++ + + + + ++ + DI++
Sbjct: 32 FSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAM---SIGRQGRVQVEDIVF 88
Query: 413 TMRNNTVKLKRLHD 454
+R + K R+ D
Sbjct: 89 LIRKDPRKFARVKD 102
>BX679664-8|CAH71330.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein5 (PGRM) (PGM5) protein.
Length = 124
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/74 (27%), Positives = 42/74 (56%)
Frame = +2
Query: 233 FQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIY 412
F KE+ MM+GFGD+ NP +V ++E++V++ + + + + ++ + DI++
Sbjct: 32 FSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAM---SIGRQGRVQVEDIVF 88
Query: 413 TMRNNTVKLKRLHD 454
+R + K R+ D
Sbjct: 89 LIRKDPRKFARVKD 102
>BC121180-1|AAI21181.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 18kD
protein.
Length = 124
Score = 40.7 bits (91), Expect = 0.006
Identities = 20/74 (27%), Positives = 42/74 (56%)
Frame = +2
Query: 233 FQKEISNMMHGFGDNPNPNAATVLLVENIVLQQLRSILQEGIFNSNLRGSKTITNYDIIY 412
F KE+ MM+GFGD+ NP +V ++E++V++ + + + + ++ + DI++
Sbjct: 32 FSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAM---SIGRQGRVQVEDIVF 88
Query: 413 TMRNNTVKLKRLHD 454
+R + K R+ D
Sbjct: 89 LIRKDPRKFARVKD 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,630,206
Number of Sequences: 237096
Number of extensions: 1272307
Number of successful extensions: 2305
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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