Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_L06
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1000 - 23220878-23221821,23222164-23223001 102 3e-22
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721... 96 4e-20
03_02_0187 - 6248226-6249226,6249296-6250148 88 1e-17
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 64 1e-10
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83... 58 1e-08
03_05_0799 + 27809301-27811550 31 1.3
06_03_0662 - 23229957-23230204,23231021-23231160,23231257-232313... 30 2.3
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 30 2.3
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841... 29 3.9
01_06_0714 + 31413195-31413221,31414238-31414786 29 3.9
01_01_0421 + 3181139-3184207 29 3.9
05_04_0031 + 17353292-17354353 29 6.9
04_03_0980 + 21406822-21409496,21410322-21410376 29 6.9
>07_03_1000 - 23220878-23221821,23222164-23223001
Length = 593
Score = 102 bits (245), Expect = 3e-22
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Frame = +2
Query: 194 IWPRPQMQSIEIPYYKFD-SDVLEIKVMDHDCPILSNAVQRSLAVLRDMLR-IASPYVNR 367
+WP+P S P+ S + + +LS A + + +L + R + +P VN
Sbjct: 35 VWPKPTSMSWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNV 94
Query: 368 NAPQQVLDDDTYDGPLKSLSIYLTSPCEEYPHFGMIESYNLTI---AADSTLRSSSIWGI 538
A L L++ ++ H G+ ESY L I A +T+ +++ WG
Sbjct: 95 TAGGAGAGAAGRGAELGYLTLAVSDLHAPLQH-GVDESYALEILPAGAAATVTAATAWGA 153
Query: 539 LRGLESWTHLFHLSDNRDQLHINKG-EVHDFPRYPHRGLLVDTSRHYISMSNILLILDAM 715
+RGLE+++ L + + G V D P YPHRGL++DT R Y +++IL +DAM
Sbjct: 154 MRGLETFSQLAWWCGRERAVLVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADILRTIDAM 213
Query: 716 AMNKMNVFHWHIVDDQSF 769
A NKMNVFHWHI D QSF
Sbjct: 214 AANKMNVFHWHITDSQSF 231
>05_04_0319 +
20171486-20171800,20171882-20171956,20172160-20172195,
20172302-20172413,20173082-20173152,20173287-20173417,
20173718-20173783,20174003-20174103,20174311-20174370,
20174463-20174496,20174852-20174950,20175019-20175078,
20175700-20175874,20175900-20175950,20176603-20176632
Length = 471
Score = 95.9 bits (228), Expect = 4e-20
Identities = 48/128 (37%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Frame = +2
Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADST-----LRSSSIWGILRGLESWTHL--F 571
L +++ + P +E +FG+ ESYNL++ A + + + +++G L LE+++ L F
Sbjct: 92 LAGVNVVVHLPGDEL-NFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQLCNF 150
Query: 572 HLSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHI 751
+ +L + D PR+P+RGLL+DTSRHY+ + I ++D+M +K+NV HWHI
Sbjct: 151 DFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHI 210
Query: 752 VDDQSFHI 775
VD+QSF I
Sbjct: 211 VDEQSFPI 218
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 87.8 bits (208), Expect = 1e-17
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Frame = +2
Query: 167 PEYPASKGAIWPRPQMQSIEIPYYKFDSDVLEIK-VMDHDCPILSNAVQRSLAVLRDMLR 343
P A K +WP+P S Y S ++ V+ H P L AV ++R
Sbjct: 39 PPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSH--PSLRQAVAFYTRLIR---- 92
Query: 344 IASPYVNRNAPQQVLDDDTYDG-PLKSLSIYLTSPCEEYPHFGMI-ESYNLTIAADS--- 508
R+AP + T P+++L++ ++ P + P + ESY L++ DS
Sbjct: 93 -----AERHAPLVPPANYTLSRVPVRTLTLSVSDP--DVPLGPAVDESYTLSVLPDSGSA 145
Query: 509 TLRSSSIWGILRGLESWTHLFHLSDNR---DQLHINKG-EVHDFPRYPHRGLLVDTSRHY 676
+ +++ WG +RGLE+++ L Q + G E+ D P + HRG+L+DT+R++
Sbjct: 146 DISAATPWGAIRGLETFSQLAWAGGGAASGGQPIVPSGIEISDRPHFTHRGILLDTARNF 205
Query: 677 ISMSNILLILDAMAMNKMNVFHWHIVDDQSFHI 775
+ +IL L AMA NK+NVFHWHI D QSF I
Sbjct: 206 YPVRDILHTLRAMAFNKLNVFHWHITDAQSFPI 238
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 786 VPDLSRLGAYHETLIYTKKDIQTVIDYXXTGG 881
VP+L+ G+Y T+ YT+ D++ ++ + + G
Sbjct: 243 VPNLANSGSYSPTMRYTENDVRHIVSFAASFG 274
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 64.5 bits (150), Expect = 1e-10
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +2
Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTI-AADSTLR----SSSIWGILRGLESWTHLF-H 574
L +++ + SP +E FG+ ESYNL++ A LR + +++G L L++ + L
Sbjct: 93 LTGVNVVVHSPEDELK-FGVDESYNLSVPTAGYPLRVQIEAQTVFGALHALQNSSRLLGE 151
Query: 575 LSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHIV 754
++D L DF R L DTSRHY+ ++ I ++D MA +K+NV HWHIV
Sbjct: 152 FLTHQDFL------TEDFLLDQMR-LHADTSRHYLPVTVIKKVIDTMAYSKLNVLHWHIV 204
Query: 755 DDQSFHI 775
D QSF I
Sbjct: 205 DAQSFPI 211
>05_01_0121 -
833885-833949,834180-834430,834545-834604,834893-834926,
835746-835805,836409-836509,836939-837039,837209-837289,
837580-837650,837738-837849,838138-838173,838865-838951,
839055-839396
Length = 466
Score = 58.0 bits (134), Expect = 1e-08
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
Frame = +2
Query: 434 LTSPCEEYPHFGMIESYNLTIAA---------DSTLRSSSIWGILRGLESWTHL--FHLS 580
+ + +E G+ ESY + +AA +T+ +++I+G +RGLE+++ L F+
Sbjct: 107 VVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGAIRGLETFSQLCVFNYD 166
Query: 581 DNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKM 730
++ + D PR+ RGLL+DTSRH++ + I ++D+M+ +K+
Sbjct: 167 TKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVIKQVIDSMSFSKL 216
>03_05_0799 + 27809301-27811550
Length = 749
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 266 KVMDHDCPILSNAVQRSLAVLRDMLRIASPYVNR 367
KV++H P++ A SLAVLR +L + S VNR
Sbjct: 90 KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNR 123
>06_03_0662 -
23229957-23230204,23231021-23231160,23231257-23231394,
23231501-23231676,23232071-23232152,23233531-23233666,
23237028-23237145
Length = 345
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 461 HFGMIESYNL--TIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKG 613
HFG+++SY++ T+ + S S I+ G + W H+F +++ NKG
Sbjct: 217 HFGLVKSYDMPCTVESASLEPKSGSKFIVGGEDMWVHVFDFFTG-EEITCNKG 268
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 227 IPYYKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRD-MLRIASPYVNRNAPQQVLDDDTY 403
IPYY FD V +++ + SN V+R ++ LRD + R P + P +V+ +
Sbjct: 143 IPYYSFDQFVRKVEKVG-----ASNRVRRCVSELRDRVARGGDPTLLHEPPVEVIPEGEP 197
Query: 404 DG 409
DG
Sbjct: 198 DG 199
>02_05_1317 -
35683659-35683756,35683904-35683966,35684068-35684182,
35684385-35684486,35684687-35684756,35684878-35684952,
35685188-35685279,35685386-35685493,35685560-35685640,
35685728-35685771,35685858-35685984
Length = 324
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 392 HLRPVVGHCGLHTDSRFGA 336
HL P V HCG H++ FGA
Sbjct: 117 HLLPGVYHCGYHSEDSFGA 135
>01_06_0714 + 31413195-31413221,31414238-31414786
Length = 191
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 265 NFKYITIKFVVRNFYRLHLRSWPNCTF 185
NF ++ + +R RL +R WPNC F
Sbjct: 76 NFAWLLLHNRLRTADRLQIRQWPNCYF 102
>01_01_0421 + 3181139-3184207
Length = 1022
Score = 29.5 bits (63), Expect = 3.9
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +2
Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADSTLRSSSIWGI--LRGLESWTHLFHLSDN 586
L L++Y + E P +NLT L S+S G L + +LF L+ +
Sbjct: 441 LTKLALYACNLFGEIPR----HIFNLTQLDTIFLHSNSFTGTVELASFLTLPNLFDLNLS 496
Query: 587 RDQLHINKGEVHD-FPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHI 751
++L + GE + +P+ G L +S + NIL L+ +N +++ H HI
Sbjct: 497 HNKLTVINGESNSSLTSFPNIGYLGLSSCNMTRFPNILKHLNKNEVNGIDLSHNHI 552
>05_04_0031 + 17353292-17354353
Length = 353
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 479 SYNLTIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKGEVHDFPRYPHRGLLV 658
S+ L+ + L +S G + W H + R + + +G HDFPR R L
Sbjct: 232 SWTLSREQGNKLLASRFRGDRLYICDWPGCVHAEERRKYM-VFRGVFHDFPRSQVRRALR 290
Query: 659 DTSRHYISM 685
DT R +++
Sbjct: 291 DTRRPTVAV 299
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 232 RNFYRLHLRSWPNCTFRCWIFGSRFHDMQTGH 137
+N LHLRS P F ++ S F D++T H
Sbjct: 734 QNLQHLHLRSCPRLQFVLPVWASSFPDLKTLH 765
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,325,994
Number of Sequences: 37544
Number of extensions: 510344
Number of successful extensions: 1195
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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