Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_L05
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 107 1e-23
08_02_0009 + 11216532-11218687,11220727-11225998 38 0.008
08_02_0003 + 11180421-11180757,11180773-11185715 38 0.008
08_02_0002 + 11173365-11173512,11173528-11178470 38 0.011
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 38 0.014
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 32 0.71
12_01_0374 - 2910752-2911516 29 5.0
06_01_0692 - 5047162-5047441,5047602-5047726,5048257-5048327,504... 29 5.0
04_03_0041 + 10046063-10046170,10046284-10046742 29 5.0
01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416 29 5.0
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 29 6.6
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 28 8.8
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 28 8.8
04_04_0852 + 28724891-28725184,28725683-28725801,28726868-28727294 28 8.8
02_05_1091 + 34044999-34045082,34046848-34047048,34047312-340475... 28 8.8
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 107 bits (257), Expect = 1e-23
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Frame = +2
Query: 254 PLDPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESI 433
P+DP S++ + V L+ +DF ++ SA L + GD++LD+ L + S
Sbjct: 3 PVDPHSYTDGDHPVTAKAALAFYLDFAASTIHASALLTLSAPHS-GDLLLDTRALAVHSA 61
Query: 434 ELDG---AQLTYKLDDPV-PNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQP 601
+ + + L D P GS LT+ LP D + ++TSPSA+ALQWL P
Sbjct: 62 STASGPPSPIPFSLADAADPVLGSALTLTLPP-----DTTSFLLTFSTSPSASALQWLSP 116
Query: 602 AQTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMSA 757
QT+ P++FSQCQ IHARS+ PC DTP + T+D + P + + + +A
Sbjct: 117 PQTASSL-PFVFSQCQSIHARSVFPCHDTPAARITFDLLLNVPTQLSAVAAA 167
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 38.3 bits (85), Expect = 0.008
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +2
Query: 293 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 472
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 1676 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 1731
Query: 473 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 652
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 1732 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1791
Query: 653 I 655
I
Sbjct: 1792 I 1792
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 38.3 bits (85), Expect = 0.008
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +2
Query: 293 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 472
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 960 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 1015
Query: 473 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 652
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 1016 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1075
Query: 653 I 655
I
Sbjct: 1076 I 1076
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 37.9 bits (84), Expect = 0.011
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +2
Query: 293 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 472
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 897 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTVKIIQLRD 952
Query: 473 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 652
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 953 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1012
Query: 653 I 655
I
Sbjct: 1013 I 1013
>11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 37.5 bits (83), Expect = 0.014
Identities = 26/121 (21%), Positives = 53/121 (43%)
Frame = +2
Query: 293 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 472
V+++ L ++ EN N D+ L + D+ + + +++ +L D
Sbjct: 711 VLENRLNKLEIELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 766
Query: 473 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 652
+ N+G+K ++LP + G ++ +K+K T S L + T H F++C
Sbjct: 767 AITNFGNKYIVRLPFKEILGIRIPVKVKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 826
Query: 653 I 655
I
Sbjct: 827 I 827
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 31.9 bits (69), Expect = 0.71
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 12/170 (7%)
Frame = +2
Query: 281 PEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE----------- 427
P A + L L D + GS + VDV +VL+++EL +
Sbjct: 18 PGFAAPRRYDLRLVPDLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGA 77
Query: 428 SIELDGAQLTYKLDDPVPNYGSKLTIQLPKRASSGD-KLKIKIKYTTSPSATALQWLQPA 604
EL A++T +D + L I+ + G+ L I K T + +
Sbjct: 78 EQELHPAEVTNVPEDEI------LIIRFNEVLPVGEGTLVIAFKGTLNDKMHGF-YRSVY 130
Query: 605 QTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMS 754
+ +G+K +Q +P AR PC D P K + + P E TV +S
Sbjct: 131 ELNGEKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSE-TVALS 179
>12_01_0374 - 2910752-2911516
Length = 254
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 689 PFVKFTYDAEVTAPEEFTVLMSALRGESRSTKTTFNQPMPFXVVSFGHCGW 841
P K Y+ A EE V + A+ ES + F + M VV G CGW
Sbjct: 147 PSRKKRYEKMAAAEEEEDVGV-AVEKESSDPRADFRESMVQMVVEMGLCGW 196
>06_01_0692 -
5047162-5047441,5047602-5047726,5048257-5048327,
5048453-5048834,5049389-5050126
Length = 531
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 479 PNYGSKL-TIQLPKRASSGDKLKIKIKYTTSPSATALQWLQ 598
P YG+ + T+ +PK+ SS K K+ + SA A WL+
Sbjct: 328 PEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLE 368
>04_03_0041 + 10046063-10046170,10046284-10046742
Length = 188
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 482 NYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGK 619
NY L+IQL AS G +K+K Y S +A +PA + K
Sbjct: 71 NYKKMLSIQLRGFASKGKLVKVKASYKLSDAAKDSPKAKPAAPAPK 116
>01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416
Length = 1030
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 269 SFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELT--IESIELD 442
S S P + I ++ N++F N LNG+ + L + + LDS++L+ +E I +
Sbjct: 425 SMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVP 484
Query: 443 GAQLTYKLD 469
+ Y +D
Sbjct: 485 LSSSVYDID 493
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 509 LPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKK 622
LP+ + KL+ T+P A LQW+ +++SG +
Sbjct: 93 LPQNKHTETKLQAPCPVVTAPLANGLQWVPKSRSSGSE 130
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 359 TLDVDVLQDIGDVVLDSSELTIESIELDG--AQLTYKLDDPV-PNYGSKLTIQLPKRASS 529
TL + +LQ + D V+DS EL E E +G ++ Y++D GS+ + +A +
Sbjct: 453 TLKLRILQLLCDHVIDSEELKTELEEREGYSEEMEYEMDSSTFAEVGSRSVLTRGSKAPA 512
Query: 530 GDKL 541
KL
Sbjct: 513 CKKL 516
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 28.3 bits (60), Expect = 8.8
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 1/147 (0%)
Frame = +2
Query: 311 LSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE-SIELDGAQLTYKLDDPVPNY 487
L L D +GSA + V V +VL+++EL ++ S +L +++ +D +
Sbjct: 25 LRLRPDLAACAFSGSAAVAVAVSAPTRFLVLNAAELAVDGSSDLVPSEVVQFEEDEIVVI 84
Query: 488 GSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQPIHARS 667
G + + + LK+ T + + + G+ +Q + AR
Sbjct: 85 GFGQDLPIGEGV-----LKMDFTGTLNDQMRGF-YRSKYEYKGESRNMAVTQFEAADARR 138
Query: 668 ILPCQDTPFVKFTYDAEVTAPEEFTVL 748
PC D P K + + P E L
Sbjct: 139 CFPCWDEPAFKAKFKLTLEVPSELVAL 165
>04_04_0852 + 28724891-28725184,28725683-28725801,28726868-28727294
Length = 279
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 397 HVSDILEHVNVESGGSV*DFVFKIHVQR*SHVFYYSLFRPRK--GRRIQRTESTHDWNLT 224
HV+ + + +E G + DF F S F L RP K GRR+ ES H WN+
Sbjct: 141 HVAYLQQIWWLEVAGEI-DFCFPAGSY--SLFFRLQLGRPHKYMGRRVYGYESIHGWNIK 197
Query: 223 ET 218
T
Sbjct: 198 PT 199
>02_05_1091 +
34044999-34045082,34046848-34047048,34047312-34047523,
34047846-34048413
Length = 354
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 597 CNHCNAVADGDVVYLILIFNLSPLEARFGNC 505
C+H NA++ G +IF S L A G+C
Sbjct: 146 CSHQNALSSGTTALTAMIFGRSLLVANAGDC 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,236,453
Number of Sequences: 37544
Number of extensions: 398605
Number of successful extensions: 942
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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