Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_L04
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical pr...    58   1e-08
Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    30   2.6  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z35637-5|CAE17723.1|  185|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>U88167-7|AAB42229.1|  378|Caenorhabditis elegans Hypothetical
           protein D2092.2 protein.
          Length = 378

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = +1

Query: 433 FNYDTMKNSLIERLESFTSAPFTVQRICELLTYPRKQYNRVDKFMRAIEKNILVVST 603
           F+ +     ++ + +SF   PFT QR+CELL  P + YN +DKF+RA++K I VV+T
Sbjct: 155 FSTEESMEFVLSKAKSFDGFPFTWQRLCELLIEPMRHYNTIDKFLRAVDKVINVVTT 211


>Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical
           protein W07G1.5a protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +1

Query: 622 RQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQ 762
           RQP PE+ +  E   NG +++ E  V+ + ED    EA E+ + E +
Sbjct: 339 RQPTPESSEEEEDEGNGDEDDDE-EVEDDEEDAGSDEAEEEPSDEEE 384


>Z50044-2|CAA90354.1|  256|Caenorhabditis elegans Hypothetical
           protein F22B5.2 protein.
          Length = 256

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 610 PGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATE 741
           P +V   E    DNA H+  G+D         E++ V WK  T+
Sbjct: 5   PEVVSWAEAVEQDNAPHIQEGADGTRTETAFTEVDGVRWKVVTQ 48


>U39999-12|AAA81110.1|  577|Caenorhabditis elegans Hypothetical
           protein F41G3.3 protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 375 DFYDTTPNTDIPPLS*RGP 431
           DFYDT P T++PP+   GP
Sbjct: 115 DFYDTVPATNVPPVKPMGP 133


>Z82076-6|CAH10809.1|  450|Caenorhabditis elegans Hypothetical
           protein W07G1.5b protein.
          Length = 450

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 616 IVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEATEQRNSEPQ 762
           + +QP PE+ +  E   NG +++ E  V+ + ED    EA E+ + E +
Sbjct: 349 VSQQPTPESSEEEEDEGNGDEDDDE-EVEDDEEDAGSDEAEEEPSDEEE 396


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 694 NVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDDVETRLIT 819
           +V+VE+E+      TEQ ++ P+ CS + H+ +  +   L++
Sbjct: 539 SVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVITVLLVS 580


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 694 NVDVEMEDVSWKEATEQRNSEPQPCSSDAHISVDDVETRLIT 819
           +V+VE+E+      TEQ ++ P+ CS + H+ +  +   L++
Sbjct: 541 SVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVITVLLVS 582


>Z35637-5|CAE17723.1|  185|Caenorhabditis elegans Hypothetical
           protein C03C10.7 protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +1

Query: 559 KFMRAIEKNILVVSTREPGIVRQPEPENGDNAEHLVNGSDNNSEYNVDVEMEDVSWKEAT 738
           +F   + ++ L    R+P  ++ P+P+     E L+  ++   E   +V+      ++A 
Sbjct: 6   RFSVTLSEDDLRPHLRKPKPLKPPKPQQSSEIEELIRRNEKREEAKKEVKRRIEEEEKAK 65

Query: 739 EQRNSEPQ 762
           EQR  + +
Sbjct: 66  EQRKRDEE 73


>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
            M03A8.2 protein.
          Length = 2275

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +1

Query: 523  LTYPRKQYNRVDKFMRAIEKNILVVSTREPGIVRQPEP-ENGDNAEHLVNGSDNNSEYNV 699
            L  PR+  +  D  MR+     +  S     +V   +  E   N    ++  D+N +  +
Sbjct: 1912 LKMPRQPLSNDDILMRSTMMGSVHPSQSVHNLVDTSDDLEEHGNFLDSIDNEDDNEKQKI 1971

Query: 700  DVEMEDVSWKEATEQRNSEPQ 762
            + EME+   KE  E+RN E Q
Sbjct: 1972 EEEMEE-DEKEEEEERNKEIQ 1991


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,948,601
Number of Sequences: 27780
Number of extensions: 456805
Number of successful extensions: 1330
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)