Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_L03
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p...    29   4.5  
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    28   7.8  

>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
            protein F10G7.10c protein.
          Length = 1824

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -3

Query: 395  KFTLTSYDLSIYHCDRSFSNISNTIHS 315
            +F   SY+L ++HC+  F++++N IHS
Sbjct: 1776 EFLRFSYEL-LFHCNLGFNDVNNQIHS 1801


>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
            protein F10G7.10a protein.
          Length = 2025

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -3

Query: 395  KFTLTSYDLSIYHCDRSFSNISNTIHS 315
            +F   SY+L ++HC+  F++++N IHS
Sbjct: 1776 EFLRFSYEL-LFHCNLGFNDVNNQIHS 1801


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
           (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -3

Query: 179 LLERLYYMT---PETLPQ*KQRKILKYSCFK*LRGLLFLQNF*NNKSK 45
           LL+ +Y+ T      LP+ K     + SCFK L  L+F QN  +++SK
Sbjct: 392 LLKSVYFQTFILTRALPRRKHDLFDEISCFKELDQLIFKQNSTSSESK 439


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,445,962
Number of Sequences: 27780
Number of extensions: 238963
Number of successful extensions: 515
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)