Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_L01
         (1091 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    27   3.5  
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac...    26   8.0  
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    26   8.0  

>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
            Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = +2

Query: 230  TAGLVWANQRNFLXKPNWGGVPKGPNGAWPGLGKPKKNF 346
            T  L WA QR F         P  PNG   G GK  KNF
Sbjct: 933  TDALEWAGQREFYEAEL---KPWSPNGKEAGRGKSFKNF 968


>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 574

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 251 NQRNFLXKPNWGGVPKGPNGAW 316
           N R F   P  G +PKGPN  +
Sbjct: 385 NTRQFTSSPIGGSMPKGPNSIY 406


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 281 WGGVPKGPNG 310
           WGG+ KGPNG
Sbjct: 77  WGGIEKGPNG 86


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,182,466
Number of Sequences: 5004
Number of extensions: 33836
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 575740598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)