Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_K24
(1030 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.58
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.58
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.76
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 5.4
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 7.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 28 9.4
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 28 9.4
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 9.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 9.4
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.58
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = +3
Query: 489 PPXHXPQSXXXGAXXTTXPPEXX--TPTPXXPXXKRXXXPXKXXXXXTQXQPXPPXHX-- 656
P PQ+ A +T P TP P + T P PP
Sbjct: 132 PAKPKPQTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAP 191
Query: 657 PXPRTKXTPPXKTXXPXPPXXXK 725
P P TK PP T P PP K
Sbjct: 192 PPPTTKAPPPPTTKAPPPPTTNK 214
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.58
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = +3
Query: 534 TTXPPEXXTPTPXXPXXKRXXXPXKXXXXXTQXQPXPPXHXPXPRTKXTPPXKTXXPXPP 713
+T PP P P P P ++ P PP P PP P PP
Sbjct: 463 STTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.76
Identities = 20/75 (26%), Positives = 23/75 (30%)
Frame = +3
Query: 489 PPXHXPQSXXXGAXXTTXPPEXXTPTPXXPXXKRXXXPXKXXXXXTQXQPXPPXHXPXPR 668
PP P+ G PP P P R P + Q PP P P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPP---RSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 669 TKXTPPXKTXXPXPP 713
+ PP P PP
Sbjct: 180 PR-NPPRTPPSPIPP 193
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/107 (21%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Frame = +1
Query: 511 PKXXAQXXQXXPQRXXPXPPXPXTXNXTXXPXKXXXXPPXHSXXHPXTXPXPEPNXXPXK 690
P+ P P PP P + P PP + P P P P P
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLV 133
Query: 691 --KQXXXXXXXXXKXPQTXTPPXRXXPXXXTXPKKKTXPXXRXPPTP 825
KQ + PP P T P + P P
Sbjct: 134 CCKQAPVPENPCCQIVAAAMPPPPSAPACCVAAPVPTNPCCQPAPRP 180
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 544 PQRXXPXPPXPXTXNXTXXPXKXXXXPPXHSXXH 645
P R P PP P T P PP H H
Sbjct: 253 PTRRPPGPPGPPTRRPPGPPGPPTRRPPGHQGHH 286
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 542 PPRGXXPXPXXPXXXTXXPPPKXXXXXHPXTAXPTXPXT 658
PP G P P P T PPP H + P T
Sbjct: 89 PPHGLGPPPPPPHYYTQPPPPPQSGYYHHQQQQHSGPTT 127
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Frame = +1
Query: 730 PQTXTPPXRXXPXXXTXPKKKTXPXXRX--------PPTPGKRAPQGXTXDPQXNTXPTR 885
P T TP R P + KKT PP P K+ P+ + +P NT R
Sbjct: 337 PATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKKRPKEPSQEPSTNTSSKR 396
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/47 (27%), Positives = 15/47 (31%)
Frame = +1
Query: 544 PQRXXPXPPXPXTXNXTXXPXKXXXXPPXHSXXHPXTXPXPEPNXXP 684
PQ P PP P T + P P P P+P P
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHP 138
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +2
Query: 536 NXPPRGXXPXPXXPXXXTXXPPPKXXXXXHPXTAXPTXPXTXXQNQTNXPXKNXQXXPXX 715
N PPR P P P + PPP+ P Q Q + Q P
Sbjct: 368 NAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP-PQYNPYQQQQQPQMQQFQQHPGY 426
Query: 716 XXQRXP 733
Q P
Sbjct: 427 YQQPMP 432
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +2
Query: 536 NXPPRGXXPXPXXPXXXTXXPPPKXXXXXHPXTAXPTXPXTXXQNQTNXPXKNXQXXPXX 715
N PPR P P P + PPP+ P Q Q + Q P
Sbjct: 752 NAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP-PQYNPYQQQQQPQMQQFQQHPGY 810
Query: 716 XXQRXP 733
Q P
Sbjct: 811 YQQPMP 816
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +2
Query: 536 NXPPRGXXPXPXXPXXXTXXPPPKXXXXXHPXTAXPTXPXTXXQNQTNXPXKNXQXXPXX 715
N PPR P P P + PPP+ P Q Q + Q P
Sbjct: 731 NAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP-PQYNPYQQQQQPQMQQFQQHPGY 789
Query: 716 XXQRXP 733
Q P
Sbjct: 790 YQQPMP 795
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/66 (25%), Positives = 20/66 (30%)
Frame = +2
Query: 536 NXPPRGXXPXPXXPXXXTXXPPPKXXXXXHPXTAXPTXPXTXXQNQTNXPXKNXQXXPXX 715
N PPR P P P + PPP+ P Q Q + Q P
Sbjct: 731 NAPPRPPPPRPAAPSVESPIPPPRTQQSMQATPGAP-PQYNPYQQQQQPQMQQFQQHPGY 789
Query: 716 XXQRXP 733
Q P
Sbjct: 790 YQQPMP 795
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 9.4
Identities = 23/110 (20%), Positives = 25/110 (22%)
Frame = +1
Query: 559 PXPPXPXTXNXTXXPXKXXXXPPXHSXXHPXTXPXPEPNXXPXKKQXXXXXXXXXKXPQT 738
P P P N P K P + P P PN P
Sbjct: 1081 PNKPGPNGPNGPSDPNK----PGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSD 1136
Query: 739 XTPPXRXXPXXXTXPKKKTXPXXRXPPTPGKRAPQGXTXDPQXNTXPTRG 888
P P + P K P P K P G N G
Sbjct: 1137 PNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSDPNKPGPNG 1186
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/96 (22%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = +1
Query: 568 PXPXTXNXTXXPXKXXXXPPXHSXXHPXTXPXPEPNXXPXKKQXXXXXXXXXKXPQ-TXT 744
P P K P P P P+PN P K P+
Sbjct: 163 PKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPK 222
Query: 745 PPXRXXPXXXTXPKKKTXPXXRXPPTPGKRAPQGXT 852
P + P P K P + P P K P+ T
Sbjct: 223 PKPKPKPKPKPNPNPKPEPKPKPKPKP-KPEPKPKT 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.135 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,546,908
Number of Sequences: 27780
Number of extensions: 168847
Number of successful extensions: 429
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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