Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_K20
(1032 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.012
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.15
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.9
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 28 1.9
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 7.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.012
Identities = 25/84 (29%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 PPLRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPRXXXXVXGRPXXPPPHXXPPTXPXKRX 433
PP+ P AP P P PP G P G P PPP PP
Sbjct: 1150 PPVPAPSGAP---PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 434 RTHAP---RAAXXAXPXQGXPPPP 496
P A P G PP P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 30.3 bits (65), Expect = 0.46
Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +2
Query: 197 PXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPF--PPXRXAXQGXPRXXXXV 370
P S P P A P PP P PP P PP G P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 371 XGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXP 472
P P P P+ R +P + P
Sbjct: 1234 AKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 29.1 bits (62), Expect = 1.1
Identities = 28/108 (25%), Positives = 30/108 (27%), Gaps = 1/108 (0%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPX-DHPXPPEXXPFPPXRXAXQGXP 352
P + P S P PL P P P D P P PP P
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPV-PIPTSTP 1050
Query: 353 RXXXXVXGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
G P PPP P + AP A G PP P
Sbjct: 1051 PVPKSSSGAPSAPPP---VPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 26.2 bits (55), Expect = 7.5
Identities = 26/103 (25%), Positives = 29/103 (28%), Gaps = 2/103 (1%)
Frame = +2
Query: 194 PPXSXRPXTPLXAHRXXPSXPP--LRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPRXXXX 367
P S P P + P P P AP P P+ P G P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 368 VXGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
P P P PP + AP P G PP P
Sbjct: 1146 SVAAPPVPAPSGAPPV---PKPSVAAP---PVPAPSSGIPPVP 1182
Score = 25.8 bits (54), Expect = 10.0
Identities = 26/105 (24%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Frame = +2
Query: 203 SXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPRXXXXVXGRP 382
S P P P + P AP P P P P A P+ V P
Sbjct: 1057 SGAPSAPPPVPAPSSEIPSIPAPSGAPPV-PAPSGIPPVPKPSVAAPPVPKPSVAV---P 1112
Query: 383 XXPPPHXXPPTXPXKRXRTHAP---RAAXXAXPXQGXPPPPSXXG 508
P P PP P A P PP P+ G
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Score = 25.8 bits (54), Expect = 10.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 351 PAXXTPXXDAPXPPHPTXXXPPXPXNXXAPTRP 449
P P AP P P+ PP P AP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 196 PXEXPTXHTPKXTQXXAXPPPPAXSXXRTPRPPXPPRXXPFPP 324
P P+ P A PP PA S P P P PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.11
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +2
Query: 194 PPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPRXXXXVX 373
PP P P A P P P AP P PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 374 GRPXXPPPHXXPP 412
P P P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.35
Identities = 32/108 (29%), Positives = 36/108 (33%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPR 355
P R PP P P A PPL A + P PP P P R A P
Sbjct: 355 PQGRSAPP----PPPPRSAPSTGRQPPPLSSSR-AVSNPPAPP---PAIPGRSAPALPPL 406
Query: 356 XXXXVXGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPPS 499
P P P PP+ P + AP + P P PPS
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPS-APPSLPMGAP-AAPPLPPS 452
Score = 30.3 bits (65), Expect = 0.46
Identities = 32/111 (28%), Positives = 35/111 (31%), Gaps = 8/111 (7%)
Frame = +2
Query: 185 RQXPPXSX-----RPXTPLXA--HRXXPSXPPL-RXPXXAPXDHPXPPEXXPFPPXRXAX 340
RQ PP S P P A R P+ PPL + P PP P P
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 341 QGXPRXXXXVXGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPP 493
P G P PP PP+ P AA P PPP
Sbjct: 434 SAPPSLP---MGAPAAPP---LPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 184 PPRXPXEXPTXHTPKXTQXXAXP-PPPAXSXXRTPRPPXPPR 306
PP P P P + P PPP+ +P P PPR
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPR 273
Score = 26.6 bits (56), Expect = 5.7
Identities = 30/121 (24%), Positives = 36/121 (29%), Gaps = 9/121 (7%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXX--APXDHPXPPEXX---PFPPXRXAX 340
P P R P+ S PP P A P PP+ P PP R A
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 341 ----QGXPRXXXXVXGRPXXPPPHXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPPSXXG 508
Q P P PPP + P +A R + P PP +
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 509 L 511
L
Sbjct: 431 L 431
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.15
Identities = 28/102 (27%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Frame = +2
Query: 194 PPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRXAXQGXPRXXXXVX 373
PP + P TP R S PP R P PP PP + + V
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPP-RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 374 GRPXXPP-PHXXPPTXP--XKRXRTHAPRAAXXAXPXQGXPP 490
P P P PP P + AP A + P PP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.20
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = -1
Query: 324 GGKGXXSGGXGWSXGAXXGXRRGGXXGXXLCALRGVXGRXLXGGS 190
GG+G GG G S G G RGG G RG G GGS
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGG----GSRGGFGGGSRGGS 178
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 2/64 (3%)
Frame = +1
Query: 184 PPRXPXEXPTXHTPKXTQXXAXPPPPAXSXXRTPRPPXP--PRXXPFPPXPXRXTGXAPX 357
P P P P PPPP PP P P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 358 XXXR 369
R
Sbjct: 1746 PGDR 1749
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 321 PLXAXPXRXXPAXXTPXXDAPXPPHPTXXXPPXPXNXXAPTRP 449
P+ P R A P AP PP P PP P P P
Sbjct: 1686 PVSTPPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 324 GGKGXXSGGXGWSXGAXXGXRRGGXXG 244
GG+G GG G + G G RGG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 27.9 bits (59), Expect = 2.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 324 GGKGXXSGGXGWSXGAXXGXRRGGXXG 244
GG+G +GG G G G R GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGG 42
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.9
Identities = 27/127 (21%), Positives = 33/127 (25%), Gaps = 4/127 (3%)
Frame = +2
Query: 131 GXRGPXSPXKTXYXGPXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEX 310
G P P PP + P T L + P PP P+
Sbjct: 152 GVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDD 211
Query: 311 XPFPPXRXAXQGXPRXXXXVXGRPXXPPPHXXPPTXPXKRXRTH----APRAAXXAXPXQ 478
+ R P P PP PPT P + T R
Sbjct: 212 Y-YSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQV 270
Query: 479 GXPPPPS 499
PPPP+
Sbjct: 271 NIPPPPA 277
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 208 PTXHTPKXTQXXAXPPPPAXSXXRTPRPPXPPRXXP 315
P TP + PPPP S TPRP P P
Sbjct: 407 PAYSTPARPTE-SPPPPPISSSSTTPRPDDKPSLPP 441
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +1
Query: 196 PXEXPTXHTPKXTQXXAXPPPPAXSXXRTPRPPXPP---RXXPFPPXP 330
P P P PPPA P PP PP P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 250 PPPPAXSXXRTPRPPXPP 303
PPPP + P PP PP
Sbjct: 765 PPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 10.0
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 8/64 (12%)
Frame = +1
Query: 187 PRXPXEXPTXHTPKXTQXXAXPPPPAXSXXRTPRP---PXPP-----RXXPFPPXPXRXT 342
P P T + + PPPP TP P P PP P PP P
Sbjct: 712 PLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVA 771
Query: 343 GXAP 354
G P
Sbjct: 772 GAGP 775
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 7.5
Identities = 27/108 (25%), Positives = 30/108 (27%), Gaps = 8/108 (7%)
Frame = +2
Query: 197 PXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRX--AXQGXPRXXXXV 370
P P P+ H+ PP P H P E P PP P
Sbjct: 203 PGEHMPPPPMH-HKPGEHMPP-------PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 254
Query: 371 XGRPXXPPP------HXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
G PPP PP H P P + PPPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.2 bits (55), Expect = 7.5
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRX--AXQGX 349
P P P P+ H PP P H P E P PP
Sbjct: 209 PPPMHHKPGEHMPPPPMH-HEPGEHMPP-------PPMHHEPGEHMPPPPMHHEPGEHMP 260
Query: 350 PRXXXXVXGRPXXPPP------HXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
P G PPP PP H P P + PPPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.2 bits (55), Expect = 7.5
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRX--AXQGX 349
P P P P+ H PP P H P E P PP
Sbjct: 222 PPPMHHEPGEHMPPPPMH-HEPGEHMPP-------PPMHHEPGEHMPPPPMHHEPGEHMP 273
Query: 350 PRXXXXVXGRPXXPPP------HXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
P G PPP PP H P P + PPPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.2 bits (55), Expect = 7.5
Identities = 28/115 (24%), Positives = 30/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 176 PXSRQXPPXSXRPXTPLXAHRXXPSXPPLRXPXXAPXDHPXPPEXXPFPPXRX--AXQGX 349
P P P P+ H PP P H P E P PP
Sbjct: 235 PPPMHHEPGEHMPPPPMH-HEPGEHMPP-------PPMHHEPGEHMPPPPMHHEPGEHMP 286
Query: 350 PRXXXXVXGRPXXPPP------HXXPPTXPXKRXRTHAPRAAXXAXPXQGXPPPP 496
P G PPP PP H P P + PPPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 250 PPPPAXSXXRTPRPPXPP 303
PPPP P PP PP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.143 0.487
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,555,774
Number of Sequences: 5004
Number of extensions: 16463
Number of successful extensions: 137
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 539240220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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