Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_K17
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 31 1.5
AL117205-6|CAB55166.2| 167|Caenorhabditis elegans Hypothetical ... 29 4.5
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 29 6.0
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 28 7.9
U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 646 YNYGIIK-ENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYFHSHLPVLGGTLG 822
Y GI+ +NEQ Y+N + P+ ++ + +L + V L + Y L G T G
Sbjct: 304 YKVGIMLCKNEQSTEEQMYNNEFSTPSFDEFLDFLGQRVTLKGFEAY-KGGLDTRGDTTG 362
Query: 823 KYGAFKERRGEXYFFFYQQLL 885
+ + E + F LL
Sbjct: 363 THSIYSEYQAHEIMFHVSTLL 383
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +1
Query: 646 YNYGIIK-ENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGLNAYYYYFHSHLPVLGGTLG 822
Y GI+ +NEQ Y+N + P+ ++ + +L + V L + Y L G T G
Sbjct: 304 YKVGIMLCKNEQSTEEQMYNNEFSTPSFDEFLDFLGQRVTLKGFEAY-KGGLDTRGDTTG 362
Query: 823 KYGAFKERRGEXYFFFYQQLL 885
+ + E + F LL
Sbjct: 363 THSIYSEYQAHEIMFHVSTLL 383
>AL117205-6|CAB55166.2| 167|Caenorhabditis elegans Hypothetical
protein Y116A8A.7 protein.
Length = 167
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 99 LIALALSSTVPEFKTTPVDAAFVEKQKKIL 188
L++L +T+PE+++ P A E KKI+
Sbjct: 30 LVSLTKRNTIPEYQSVPPGAVITEPAKKII 59
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 479 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 306
+ L H +G V +I+G RDG F HF V K +E +Q LG ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463
Query: 305 IF--VGFH 288
+F V +H
Sbjct: 464 LFDLVAYH 471
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 479 IXLVHVDSGVACCFVETFKIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHE 306
+ L H +G V +I+G RDG F HF V K +E +Q LG ++ V H E
Sbjct: 407 VLLTHKPTGSFLVRVSE-RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDE 463
Query: 305 IF--VGFH 288
+F V +H
Sbjct: 464 LFDLVAYH 471
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -1
Query: 281 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 141
+ + GL + +LS+IV L+ + + Q LLLLF ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -1
Query: 281 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 141
+ + GL + +LS+IV L+ + + Q LLLLF ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298
>U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical
protein C03G6.8 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 393 LFKLFYYAKDFECFYKTACYARVYMNQXNVLI-RLLH-SYYPALR 521
L + Y K FECF+K + R+ + + +L+ ++LH S+Y R
Sbjct: 200 LLTITEYIKTFECFHKISSNDRLVLTRHIILMCKILHESHYAVSR 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,932,509
Number of Sequences: 27780
Number of extensions: 392406
Number of successful extensions: 1163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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