Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_K11
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.035
05_07_0359 - 29539294-29540832,29542366-29542518 32 0.58
05_01_0142 - 940421-940701,941262-941574 31 1.3
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.8
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 31 1.8
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 31 1.8
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.8
08_01_0059 - 394001-394708 30 2.3
01_07_0082 - 40965947-40967023 30 2.3
07_01_0479 + 3606663-3607448 30 3.1
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 4.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.4
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 5.4
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.4
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 28 9.4
03_05_0067 - 20460206-20460703,20461255-20461530 28 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 36.3 bits (80), Expect = 0.035
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
PP +G PP KGP P PP P P +GG P P G
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPP--PPPPPGGKKGGPPPPPPKG 384
Score = 33.5 bits (73), Expect = 0.25
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGA---XXPPGXPXXTPXPXQGGXXPXPXPGAXXGXA 928
PP + PP KGP P PP P P P GG P P G A
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = +2
Query: 758 RGEPPDRGXRA---XPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXA 928
+G PP + PP KGP P G P P P G P PG G A
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP-PPPPPKGGASRPPAAPGVPTGSA 400
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXK-GPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
RG PP + + PP K GP RP + A P P P +G P P A
Sbjct: 124 RGRPPKKASSSAPPQKRGPGRPRKNTALFP--VPVLEAKPGRGRPRKNPLPVA 174
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
PP G A PP G P Q G P G P P GG P PG+
Sbjct: 55 PPPPG--AYPPPPGAY-PPQHGYPQPGGYPPPGGYPQHGGYPPAGYPGS 100
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXGRR 940
G PP G P G RP G P P P GG P PG G RR
Sbjct: 89 GLPPGGGGAPGPLGGGGARPPGGGGGGGP--PSLPPGAGGGGGARPPAPGGGGGGGAPRR 146
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 811 APTPXKXSEXXPGPPXGDPXAXPGRGXTXP 900
AP P PGPP P A PG T P
Sbjct: 598 APPPPPPKSTGPGPPRPPPPAMPGSSKTRP 627
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 30.7 bits (66), Expect = 1.8
Identities = 29/114 (25%), Positives = 34/114 (29%)
Frame = +2
Query: 566 EGAPRXKTXNXXGGXTTXTPRRNXGXXIKXDREXXTPAPXARXXXATPAHRXQRXRXGAX 745
+G P G T P + R P P A A+PA A
Sbjct: 12 QGVPGRPVSAFVPGAATAAPPPSSFGAASAPRAPFVPPPQAA---ASPAAPFAAAPPAAI 68
Query: 746 XRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP R A PP +GP A PP P + QG P P
Sbjct: 69 AGYRGPPPPQRPFGAGPPQQGPF----AAAAPPPQGPFTSAPSSQGPFAAAPQP 118
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +2
Query: 779 GXRAXPPXKGPXRPXQXGAXXPP----GXPXXTPXPXQGGXXPXPXP 907
G PP + P P Q PP G P P P GG P P P
Sbjct: 263 GPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPX-----QXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP RA PP P RP + A PP P P P P P P
Sbjct: 17 PPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPP 68
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP RA PP P P + A PP P P P P P
Sbjct: 3 PPPPPRRAPPPPATPPPPPRR-APPPPSPPIRPPPPPTPRPYAPPPP 48
>01_07_0082 - 40965947-40967023
Length = 358
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = +2
Query: 788 AXPPXKGPXRPXQXGAXXPP----GXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
A P GP G PP G P P P G P P P A G G
Sbjct: 239 AYPAAAGPSTAAPYGTAPPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGGGYG 291
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +2
Query: 761 GEPPDRGX-RAXPPXKGPX--RPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G PP G PP GP RP G PPG P P P P PG
Sbjct: 200 GPPPPPGPFMRGPPPMGPPQVRPGMPGGP-PPGMRPGMPPPPFRPGMPPPPPG 251
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = +2
Query: 674 PAPXARXXXATPAHRXQRXRXGAXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGX 853
PAP A TP GA PP A PP P PP
Sbjct: 292 PAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPPPAPPPPPPPPSRFNNTTPKPP-P 350
Query: 854 PXXTPXPXQG 883
P P P G
Sbjct: 351 PPPPPEPPTG 360
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXP--XXTPXPXQGGXXPXPXP 907
+G PP PP GP P Q PG P P P Q P P P
Sbjct: 45 QGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPP 96
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 764 EPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
+PP G + PP GP +P P P P P + G P P P
Sbjct: 179 KPPKPGPKPKPPKPGP-KPKPK---PPKPGPKPKPKPPKPGPKPKPGP 222
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 755 ARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGG 886
A PP R A PP P +P G PP P P GG
Sbjct: 917 ALSPPPPRPPGAPPPPPPPGKP--GGPPPPPPPPGSLPRNLAGG 958
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 788 AXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
A PP + P RP Q PP P P P P P P
Sbjct: 705 APPPLQPPARPAQHPHLQPPARPAQQP-PRPPVTQPLPPP 743
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
PP + +A PP P P PP P P Q P P GA
Sbjct: 16 PPPQYFQAGPP---PPPPQYFQGAHPPAAMWGQPPPPQAAPPPAPAGGA 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.134 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,746,814
Number of Sequences: 37544
Number of extensions: 211675
Number of successful extensions: 524
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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