Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_K11
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.097
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.097
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.097
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 34 0.13
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 34 0.13
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.17
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.39
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 33 0.39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.52
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.52
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 32 0.68
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 30 2.1
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 30 2.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 30 2.1
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.8
U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protei... 30 2.8
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 2.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.8
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 30 2.8
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.6
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 4.8
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 4.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 4.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 4.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 4.8
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 6.4
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 6.4
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.4
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.4
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.4
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 6.4
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 6.4
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 6.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.4
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 28 8.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G PP PP G P P PP P P +GG P P PG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPP----GXPXXTPXPXQGGXXPXPXPGAXXG 922
G PP G PP G P G PP G P P P GG P P G
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
G PP G PP G P G PP P P P GG P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPI-TGGPPPPPPPGGLP-PISGGPPPPPPP 764
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G PP PP G P P G P P P GG P P P G G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +2
Query: 779 GXRAXPPXKG-----PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G A PP G P P G PP P P P GG P P PG + G
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G PP PP G P P PP P P +GG P P PG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPP----GXPXXTPXPXQGGXXPXPXPGAXXG 922
G PP G PP G P G PP G P P P GG P P G
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
G PP G PP G P G PP P P P GG P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPI-TGGPPPPPPPGGLP-PISGGPPPPPPP 764
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G PP PP G P P G P P P GG P P P G G
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +2
Query: 779 GXRAXPPXKG-----PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G A PP G P P G PP P P P GG P P PG + G
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G PP PP G P P PP P P +GG P P PG
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 4/58 (6%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPP----GXPXXTPXPXQGGXXPXPXPGAXXG 922
G PP G PP G P G PP G P P P GG P P G
Sbjct: 317 GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
G PP G PP G P G PP P P P GG P P P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPI-TGGPPPPPPPGGLP-PISGGPPPPPPP 347
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G PP PP G P P G P P P GG P P P G G
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +2
Query: 779 GXRAXPPXKG-----PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G A PP G P P G PP P P P GG P P PG + G
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP-PITGGPPPPPPPGGLPPISGG 340
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = +2
Query: 767 PPDR-GXRAXPPXKGPXRPX-QXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
PP R G R P GP P G PPG P P +GG PG G
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGEDAAPGPDAG 199
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Frame = +2
Query: 707 PAHRXQRXRXGAXXRXARGEPPDRGXRAXP--PXKGPXRPXQXGAXXPPGXPXXTPXPXQ 880
P H G + +RG P G R P P GP +P Q G PG P P
Sbjct: 191 PGHPGSPGNPGRGGQRSRGLPGPSG-RPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGH 249
Query: 881 GGXXPXP-XPGA 913
G P PGA
Sbjct: 250 PGQAGTPGTPGA 261
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXP 901
+G PP G + PP P PP P +P P G P P
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP PP G P G+ PP P P G P P P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXX-TPXPXQGGXXPXPXPGA 913
R R PP PP KG P G+ PP P +P P + G P P G+
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 279
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRA 851
PPR R + PPT G P G P R P R PR
Sbjct: 332 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP---GKSSEESSESREGPRGGPRGGPRG 388
Query: 852 XPGXPXXXARAGXHXPRDPXR--XXGGPGXG 938
P + PR P R G P G
Sbjct: 389 GPRKSSEESSESREEPRGPRRSPPTGSPPTG 419
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPG----QXPXXRXRXDPXKXERX 839
P P R+ PPT G P GSP T P Q P R P
Sbjct: 404 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 463
Query: 840 XPRAXPGXP-XXXARAGXHXPRDPXR--XXGGPGXG 938
R G P + PR P R G P G
Sbjct: 464 TGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTG 499
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
PP G PP P P G+ PP P P G P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXP 901
+G PP G + PP P PP P +P P G P P
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP PP G P G+ PP P P G P P P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXX-TPXPXQGGXXPXPXPGA 913
R R PP PP KG P G+ PP P +P P + G P P G+
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 300
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRA 851
PPR R + PPT G P G P R P R PR
Sbjct: 353 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP---GKSSEESSESREGPRGGPRGGPRG 409
Query: 852 XPGXPXXXARAGXHXPRDPXR--XXGGPGXG 938
P + PR P R G P G
Sbjct: 410 GPRKSSEESSESREEPRGPRRSPPTGSPPTG 440
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPG----QXPXXRXRXDPXKXERX 839
P P R+ PPT G P GSP T P Q P R P
Sbjct: 425 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 484
Query: 840 XPRAXPGXP-XXXARAGXHXPRDPXR--XXGGPGXG 938
R G P + PR P R G P G
Sbjct: 485 TGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTG 520
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
PP G PP P P G+ PP P P G P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXP 901
+G PP G + PP P PP P +P P G P P
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
PP PP G P G+ PP P P G P P P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXX-TPXPXQGGXXPXPXPGA 913
R R PP PP KG P G+ PP P +P P + G P P G+
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 285
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRA 851
PPR R + PPT G P G P R P R PR
Sbjct: 338 PPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP---GKSSEESSESREGPRGGPRGGPRG 394
Query: 852 XPGXPXXXARAGXHXPRDPXR--XXGGPGXG 938
P + PR P R G P G
Sbjct: 395 GPRKSSEESSESREEPRGPRRSPPTGSPPTG 425
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Frame = +3
Query: 672 PPRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPG----QXPXXRXRXDPXKXERX 839
P P R+ PPT G P GSP T P Q P R P
Sbjct: 410 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPP 469
Query: 840 XPRAXPGXP-XXXARAGXHXPRDPXR--XXGGPGXG 938
R G P + PR P R G P G
Sbjct: 470 TGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTG 505
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
PP G PP P P G+ PP P P G P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +2
Query: 767 PPDR-GXRAXPPXKGPXRPX-QXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXGR 937
PP R G R P GP P G PPG P P +GG P G A R
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPR 204
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +2
Query: 758 RGEPPDRGXRAXPPXKGPX-RPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
RGE G P G +P G PPG P P G P P A
Sbjct: 225 RGEAGPAGQPGSPGNDGESGKPGNAGRPGPPGAPGKNGTPGVRGEDAAPGPDA 277
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/77 (24%), Positives = 26/77 (33%)
Frame = +3
Query: 702 QXPPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRAXPGXPXXXAR 881
Q P G +P +G+P AP + P + P PG P +
Sbjct: 180 QPGPKGPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAPGEAGPQGPPGQPGTPGQNGQ 239
Query: 882 AGXHXPRDPXRXXGGPG 932
G P+ P G PG
Sbjct: 240 PGQPGPKGPSGQPGQPG 256
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXA 928
G P + G + PP + P P Q G PG + P Q G P P G A
Sbjct: 217 GAPGEAGPQG-PPGQ-PGTPGQNGQPGQPGPKGPSGQPGQPGSDGNPGPAGQAGQA 270
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXR---PXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
PP G PP P R P PP P P GG P P PG
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = +2
Query: 731 RXGAXXRXARGEPPDRGXR---AXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQG-GXXPX 898
R G PP G R PP P P PP P P P G G P
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Query: 899 PXP 907
P P
Sbjct: 384 PPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXR---PXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
PP G PP P R P PP P P GG P P PG
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = +2
Query: 731 RXGAXXRXARGEPPDRGXR---AXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQG-GXXPX 898
R G PP G R PP P P PP P P P G G P
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Query: 899 PXP 907
P P
Sbjct: 394 PPP 396
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.68
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 758 RGEPPDRGXR--AXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGG 886
+GEP + R + P KGP P G PPG P TP P G
Sbjct: 240 KGEPGNNSIRQISLPGRKGP--PGLPGQCGPPGPPGYTPPPGPPG 282
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +2
Query: 731 RXGAXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
R A R A PP PP + P +P + A PP P P P + P P P
Sbjct: 165 RTAASTRTAISAPPP----PRPPPQEPPKPVEQAAPPPP--PAPMPVPVEKAPEPVPAP 217
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/81 (29%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 674 PAPXARXXXATPAHRXQRXRXGAXXRXARGEPPDRGXRAXP-------PXKGPXRPXQXG 832
P P P Q R G R RG +G P P GP P Q G
Sbjct: 205 PGPPGHSDEPKPGQPGQPGRAGP--RGPRGVAGIKGKDGAPGSPGQPGPRGGPGEPGQDG 262
Query: 833 AXXPPGXPXXTPXPXQGGXXP 895
A PG P P + G P
Sbjct: 263 APGQPGLPGSDGTPGEKGICP 283
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Frame = +2
Query: 755 ARGEPPDRGXRAXP----PXKGPXRPXQXGAXXP---PGXPXXTPXPXQGGXXPXPXPG 910
A G+P G P P GP +P Q G P PG P P G P PG
Sbjct: 159 APGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPG 217
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/81 (27%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Frame = +3
Query: 711 PTXXSGXGXEPXHXXXEGSPRTAAPG-------QXPXXRXRXDPXKXERXXPRAXPGXPX 869
P G EP H +G P APG P + P + P G
Sbjct: 99 PPGEGGQSGEPGHDGDDGKP--GAPGVIVAITHDIPGGCIKCPPGRPGPRGPSGLVGPAG 156
Query: 870 XXARAGXHXPRDPXRXXGGPG 932
G H P P GGPG
Sbjct: 157 PAGDQGRHGPPGPTGGQGGPG 177
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +3
Query: 675 PRPXRAXXXQXPPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRAX 854
PR P G P +G P P R P PR
Sbjct: 145 PRGPSGLVGPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGPP-----GPRGE 199
Query: 855 PGX---PXXXARAGXHXPRDPXRXXGGPG 932
PG P RAG PR P G PG
Sbjct: 200 PGTEYRPGQAGRAGPPGPRGPPGPEGNPG 228
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPX-QXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
G+P G P GP P GA PG P P Q G PGA
Sbjct: 155 GQPGADGQGGAPGPAGPEGPAGDAGAPGAPGAPGNDGQPGQNGQRSTGTPGA 206
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Frame = +3
Query: 672 PPRPXRAXXXQXP-PTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPR 848
P P ++ P P +G P GSP PG+ R R P R P+
Sbjct: 157 PGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGN--PGRG-GQRSRGTPGASGRPGPQ 213
Query: 849 AX---PGXPXXXARAGXHXPRDPXRXXGGPG 932
PG P AG P+ P G PG
Sbjct: 214 GPAGAPGQPGRSGGAGTPGPQGPPGPSGQPG 244
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = +2
Query: 674 PAPXARXXXATPAHRXQRXRXGAXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGX 853
P+P R A P R + R G PP G R PP P P G PP
Sbjct: 763 PSPVPRPAPAPPGGR----QAPMPPRGGPGAPPPPGMR--PP---PGAPGGGGGMYPPLI 813
Query: 854 PXXTPXPXQG 883
P P P G
Sbjct: 814 PTRVPTPSNG 823
>U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protein
53 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Frame = +2
Query: 659 REXXTPAPXARXXXATPAHRXQRXRXGAXXRXA----RGEPPDRGXRAXPPXKGP-XRPX 823
RE T P + QR R G A RGEP +RG + P GP P
Sbjct: 5 RECPTGRPGREGGDGPKGSKGQRGRTGQQGDSAPPSIRGEPGERGDKGFPGVAGPAGEPG 64
Query: 824 QXG----AXXPPGXPXXT 865
+ G + PPG T
Sbjct: 65 EPGHIYVSDGPPGKDGET 82
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRP-XQXGAXXPPGXPXXTPXPXQGG 886
G P D+G P GP P + G PPG P P G
Sbjct: 181 GAPGDKGPAGQPGRNGPDGPNGEPGPKGPPGQPGADGQPGMPG 223
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
Frame = +2
Query: 632 NXGXXIKXDREXXTPAPXARXXXATPAHRXQRXRXGAXXRXARGEPPD-RGXRAXPPXKG 808
N G K E TP P P G PP G P KG
Sbjct: 120 NPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKG 179
Query: 809 PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGA 913
P P G P P P + G P PGA
Sbjct: 180 PAGPPGPGGKPGPAGP-----PGENGNNGEPQPGA 209
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/70 (32%), Positives = 25/70 (35%)
Frame = +2
Query: 674 PAPXARXXXATPAHRXQRXRXGAXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGX 853
P+P R A P R + R G PP G R PP P P G PP
Sbjct: 763 PSPVPRPAPAPPGGR----QAPMPPRGGPGAPPPPGMR--PP---PGAPGGGGGMYPPLI 813
Query: 854 PXXTPXPXQG 883
P P P G
Sbjct: 814 PTRVPTPSNG 823
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKG-PXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G P D G P G P R Q G PPG P P G P PG
Sbjct: 211 GNPGDAGATGAPGDDGAPGRDGQPGQSGPPGPPG--PPGNVGEAGPPGKPG 259
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXP 856
G+P D+G R P P P Q G PPG P
Sbjct: 231 GKPGDQGPRGPPGI--PGAPGQPGRPGPPGEP 260
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXP 856
G+P D+G R P P P Q G PPG P
Sbjct: 212 GKPGDQGPRGPPGI--PGAPGQPGRPGPPGEP 241
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 707 PAHRXQRXRXGAXXRXAR-GEPPDRGXRAXPPXKGPX-RPXQXGAXXPPGXPXXTPXPXQ 880
P R + G + R G P RG P G P Q G PG P P
Sbjct: 622 PGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGS 681
Query: 881 GGXXPXPXPGAXXG 922
G P P G
Sbjct: 682 PGQDGYPGPSGIPG 695
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 707 PAHRXQRXRXGAXXRXAR-GEPPDRGXRAXPPXKGPX-RPXQXGAXXPPGXPXXTPXPXQ 880
P R + G + R G P RG P G P Q G PG P P
Sbjct: 879 PGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGS 938
Query: 881 GGXXPXPXPGAXXG 922
G P P G
Sbjct: 939 PGQDGYPGPSGIPG 952
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = +2
Query: 707 PAHRXQRXRXGAXXRXAR-GEPPDRGXRAXPPXKGPX-RPXQXGAXXPPGXPXXTPXPXQ 880
P R + G + R G P RG P G P Q G PG P P
Sbjct: 878 PGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGS 937
Query: 881 GGXXPXPXPGAXXG 922
G P P G
Sbjct: 938 PGQDGYPGPSGIPG 951
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
G+PP P P +P G PPG P P + G P A G
Sbjct: 134 GKPPTAPCEPTTPP--PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 708 PPTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPRAXP 857
PP G P PRT P P R P +R PR P
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/95 (23%), Positives = 26/95 (27%)
Frame = +2
Query: 623 PRRNXGXXIKXDREXXTPAPXARXXXATPAHRXQRXRXGAXXRXARGEPPDRGXRAXPPX 802
P G + PAP A+P + A PP R R PP
Sbjct: 94 PYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPR 153
Query: 803 KGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP 907
P R P P TP + P P
Sbjct: 154 SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXGXAXG 934
G P G P G Q G PPG P P G P P G G
Sbjct: 259 GPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAGGG 316
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
G+PP P P +P G PPG P P + G P A G
Sbjct: 134 GKPPTAPCEPTTPP--PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 733 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 784
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 336 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 696 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 747
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 208 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 259
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 733 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 784
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 336 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 696 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 747
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
G P G + P GP P G PPG P P + G P
Sbjct: 237 GPPGPPGPKGAPGPDGP--PGADGQSGPPGPPGPAGTPGEKGICP 279
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
G+PP P P +P G PPG P P + G P A G
Sbjct: 127 GKPPVAPCEPTTPP--PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 178
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +2
Query: 701 ATPAHRXQRXRXG-AXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPX 877
A P R G A A G + G A P P + G PPG P P
Sbjct: 175 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPG 234
Query: 878 QGGXXPXPXPGAXXG 922
G P P G
Sbjct: 235 NDGPPGPPGPKGAPG 249
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/75 (26%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +2
Query: 701 ATPAHRXQRXRXGAXXRX-ARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPX 877
A P + + GA + A G P D G A P G P G P + P
Sbjct: 181 AAPGEQGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPG 240
Query: 878 QGGXXPXPXPGAXXG 922
G P P G
Sbjct: 241 NDGTPGQPGPKGPPG 255
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/75 (26%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +2
Query: 701 ATPAHRXQRXRXGAXXRX-ARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPX 877
A P + + GA + A G P D G A P G P G P + P
Sbjct: 181 AAPGEQGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPG 240
Query: 878 QGGXXPXPXPGAXXG 922
G P P G
Sbjct: 241 NDGTPGQPGPKGPPG 255
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
G P G + P GP P G PPG P P + G P
Sbjct: 237 GPPGPPGPKGAPGPDGP--PGADGQSGPPGPPGPAGTPGEKGICP 279
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
G+PP P P +P G PPG P P + G P A G
Sbjct: 127 GKPPVAPCEPTTPP--PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 178
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +2
Query: 701 ATPAHRXQRXRXG-AXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPX 877
A P R G A A G + G A P P + G PPG P P
Sbjct: 175 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPG 234
Query: 878 QGGXXPXPXPGAXXG 922
G P P G
Sbjct: 235 NDGPPGPPGPKGAPG 249
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 208 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 259
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 336 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 387
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 749 RXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
R A G P G R GP P G PPG P G P PG
Sbjct: 675 RGADGAPGLHGSRGDQGLPGP--PGMPGLAGPPGPPGSGTGHGSGADGPQGPPG 726
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/88 (23%), Positives = 26/88 (29%), Gaps = 1/88 (1%)
Frame = +3
Query: 672 PPRPXRAXXXQXP-PTXXSGXGXEPXHXXXEGSPRTAAPGQXPXXRXRXDPXKXERXXPR 848
P P ++ P P +G P GSP G + P
Sbjct: 157 PGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPA 216
Query: 849 AXPGXPXXXARAGXHXPRDPXRXXGGPG 932
PG P AG P+ P G PG
Sbjct: 217 GGPGQPGHSGGAGSPGPQGPPGPSGQPG 244
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXP-PXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPG 910
G PP G P P +P G PG P GG P PG
Sbjct: 208 GSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPG 258
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 794 PPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXP-GAXXGXA 928
PP P P PP P P P GG P P P G G A
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPP---PPPMLGGPPPPPPPPGGLMGPA 603
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXP 856
PP PP GP P G PPG P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXPXPXPGAXXG 922
G+PP P P +P G PPG P P + G P A G
Sbjct: 132 GKPPVAPCEPTTPP--PCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPG 183
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +2
Query: 701 ATPAHRXQRXRXG-AXXRXARGEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPX 877
A P R G A A G + G A P P + G PPG P P
Sbjct: 180 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPG 239
Query: 878 QGGXXPXPXPGAXXG 922
G P P G
Sbjct: 240 NDGPPGPPGPKGAPG 254
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQGGXXP 895
G P G + P GP P G PPG P P + G P
Sbjct: 242 GPPGPPGPKGAPGPDGP--PGVDGQSGPPGPPGPAGTPGEKGICP 284
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 7/81 (8%)
Frame = +3
Query: 711 PTXXSGXGXEPXHXXXEGSPRTAAPG-------QXPXXRXRXDPXKXERXXPRAXPGXPX 869
P G EP H +G P APG P + P P G
Sbjct: 99 PPGEGGQSGEPGHDGDDGKP--GAPGVIVAITHDIPGGCIKCPPGCPGPRGPSGLVGPAG 156
Query: 870 XXARAGXHXPRDPXRXXGGPG 932
G H P P GGPG
Sbjct: 157 PAGDQGRHGPPGPTGGQGGPG 177
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 767 PPDRGXRAXPPXKGPXRPXQXGAXXPPGXP 856
PP PP GP P G PPG P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +2
Query: 761 GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXPXXTPXPXQG-GXXPXPXPG 910
G P G G RP G PPG P P G G P PG
Sbjct: 236 GAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPG 286
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/84 (25%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +2
Query: 680 PXARXXXATPAHRXQRXRXGAXXRXAR-GEPPDRGXRAXPPXKGPXRPXQXGAXXPPGXP 856
P A TP + + GA G PP + P P +P G PPG P
Sbjct: 107 PGAAGPAGTPGKPGRPGKAGAPGLPGNPGRPPQQPCEPITPP--PCKPCPQGPAGPPGPP 164
Query: 857 XXTPXPXQGGXXPXPXPGAXXGXA 928
G P G A
Sbjct: 165 GPAGDAGSDGSPGAPGSDGQPGAA 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.134 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,666,121
Number of Sequences: 27780
Number of extensions: 158369
Number of successful extensions: 984
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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