Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_J22
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   2.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.9  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   2.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.8  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.6  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   8.8  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   8.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 234 YRSSAHSCAGRWVLDT 281
           YR  A SC   WVLDT
Sbjct: 131 YRIHADSCDRLWVLDT 146


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 234 YRSSAHSCAGRWVLDTVVL 290
           YR     C   W+LDT +L
Sbjct: 124 YRMQVDKCGRLWILDTGIL 142


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 419 VLVMIKSAPALKKSRCVLTTSFGCV 345
           +L M ++ PA   S+C LTT   C+
Sbjct: 151 LLPMNRNRPAYLASKCALTTLTDCL 175


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 309 RR*STVECSFYPHTSKRSCQ 368
           R  S +EC+  P +S  SCQ
Sbjct: 367 RNGSMIECNISPRSSADSCQ 386


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 207 SSFLSRFVGLKMFSNLYSAF 148
           SSF+ R +G ++  ++YS F
Sbjct: 116 SSFMERMIGWEIGCDVYSVF 135


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 207 SSFLSRFVGLKMFSNLYSAF 148
           SSF+ R +G ++  ++YS F
Sbjct: 116 SSFMERMIGWEIGCDVYSVF 135


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 826 RLTTECKPAFVPGNSR 779
           RL  E KP   PGN+R
Sbjct: 30  RLRREAKPEAEPGNNR 45



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 826 RLTTECKPAFVPGNSR 779
           RL  E KP   PGN+R
Sbjct: 254 RLRREAKPEAKPGNNR 269


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 826 RLTTECKPAFVPGNSR 779
           RL  E KP   PGN+R
Sbjct: 31  RLRREAKPEAEPGNNR 46


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 826 RLTTECKPAFVPGNSR 779
           RL  E KP   PGN+R
Sbjct: 2   RLRREAKPEAEPGNNR 17



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 826 RLTTECKPAFVPGNSR 779
           RL  E KP   PGN+R
Sbjct: 142 RLRREAKPEAEPGNNR 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,555
Number of Sequences: 438
Number of extensions: 5938
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)