Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_J17
(926 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 398 e-110
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 398 e-110
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 398 e-110
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 398 e-110
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 398 e-110
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 398 e-110
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 397 e-110
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 397 e-110
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 396 e-110
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 256 8e-68
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 1e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 3e-53
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 2e-43
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 166 1e-40
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 32 2.6
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 224
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 398 bits (981), Expect = e-110
Identities = 192/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 397 bits (978), Expect = e-110
Identities = 191/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 397 bits (977), Expect = e-110
Identities = 191/221 (86%), Positives = 203/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 396 bits (976), Expect = e-110
Identities = 191/221 (86%), Positives = 202/221 (91%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 465
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLR 124
Query: 466 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 645
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 184
Query: 646 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 256 bits (627), Expect = 8e-68
Identities = 121/140 (86%), Positives = 127/140 (90%)
Frame = +1
Query: 349 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 528
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 529 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 708
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 709 DHILVTEPKDEPVPLEPTSE 768
DH+ + EPKDE +P P SE
Sbjct: 121 DHVSIVEPKDEILPTTPISE 140
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 1e-58
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +1
Query: 277 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 456
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 457 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 636
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 637 LGIKVKI 657
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (507), Expect = 3e-53
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 444
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (425), Expect = 2e-43
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = +1
Query: 472 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 651
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 652 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 768
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 166 bits (403), Expect = 1e-40
Identities = 81/91 (89%), Positives = 86/91 (94%)
Frame = +1
Query: 106 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 285
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 5 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 286 RIRELTSVVQKRFNIPEQSVELYAEKVATRG 378
RIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 32.3 bits (70), Expect = 2.6
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +3
Query: 615 CASQTRSTRNQGQNHVAVGPARQERXEEATTRPHPGNRAQGRARAPR 755
CAS RS R Q Q P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,735,530
Number of Sequences: 237096
Number of extensions: 2893980
Number of successful extensions: 11275
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11274
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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