Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_J16
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a pr...    35   0.35 
U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a pr...    35   0.35 
U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a pr...    35   0.35 
L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens (c...    35   0.35 
BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a ...    35   0.35 
BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a ...    35   0.35 
AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A ...    35   0.35 

>U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84


>U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLHILI---PLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H  I   PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINFPLTTE 84


>U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84


>L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens
           (clone 01) liver expressed protein mRNA, 3'end. ).
          Length = 147

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 21  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 75


>BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84


>BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84


>AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A
           protein.
          Length = 156

 Score = 35.1 bits (77), Expect = 0.35
 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA*XNRWMLH---ILIPLTXE 883
           KG H  + +KIR S  FR+ KT      PKY   SA     + H   I  PLT E
Sbjct: 30  KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,431,362
Number of Sequences: 237096
Number of extensions: 1109246
Number of successful extensions: 2382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2382
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)