Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_J16
         (897 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    41   0.002
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    41   0.002
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    40   0.003
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    38   0.025
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    29   8.6  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    29   8.6  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA-*XNRWMLHILI--PLTXE 883
           KG  G R RKIR +VHFR+  T + P  PKY   S    NR   + +I  PLT E
Sbjct: 143 KGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 197


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA-*XNRWMLHILI--PLTXE 883
           KG  G R RKIR +VHFR+  T + P  PKY   S    NR   + +I  PLT E
Sbjct: 151 KGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 205


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 728 KGEHGKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA-*XNRWMLHILI--PLTXE 883
           KG  G R RKIR +VHFR+  T + P  PKY   S    NR   + +I  PLT E
Sbjct: 151 KGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 205


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +2

Query: 740 GKRVRKIRNSVHFRKXKTFEPPXHPKYQGSSA-*XNRWMLHILI--PLTXE 883
           G R RKIR +VHFR+  T + P  PKY   S    NR   + +I  PLT E
Sbjct: 147 GTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTE 197


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 749 LSSHVHLYNLPLSLKCFSNRFHYFFLSLNPSLFG 648
           +S+   +Y+ P  LK  +NR H+F L+L   + G
Sbjct: 365 MSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 749 LSSHVHLYNLPLSLKCFSNRFHYFFLSLNPSLFG 648
           +S+   +Y+ P  LK  +NR H+F L+L   + G
Sbjct: 365 MSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,714,669
Number of Sequences: 53049
Number of extensions: 311900
Number of successful extensions: 849
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)