Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_J09
(1269 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 34 0.19
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 34 0.19
Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical pr... 33 0.33
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.43
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.43
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 33 0.57
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.57
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.57
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.57
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 33 0.57
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 0.75
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.7
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 31 1.7
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 31 2.3
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 31 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 2.3
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 31 2.3
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 31 2.3
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 31 2.3
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 31 2.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.0
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 30 4.0
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 30 4.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 4.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 4.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 4.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.3
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 9.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 9.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 9.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 9.3
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.19
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 1266 PPXPPPXXPL--PPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP PL PPA T P PP T PP S PP
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKPT----IRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 34.3 bits (75), Expect = 0.19
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 1266 PPXPPPXXPL--PPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP PL PPA T P PP T PP S PP
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKPT----IRPPPIPASPPP 333
>Z81130-6|CAB03419.4| 312|Caenorhabditis elegans Hypothetical protein
T23G11.7b protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXP 1171
PP PP +PP + +PN P HT S+ P
Sbjct: 217 PPQPPARNNIPPPSYSSTPNLPSHTPFSAPPP 248
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP LP P PP + P L PP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.43
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP LP P PP + P L PP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.57
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXL 1159
PPP PP PLPP P PP PP L
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGNL 807
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP PP + SP PP + PP S PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPP 274
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
P PPP PP T SP PP S PP S PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPP 291
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 1269 PPPXPPPXXPLPP-AXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP P P PP A P PP + + PP PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPPT 1141
P PPP PP SP PP S PP PPT
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPT 309
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP PP + SP PP + PP S PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPP 295
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
P PPP PP T SP PP S PP S PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPP 312
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 1269 PPPXPPPXXPLPP-AXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP P P PP A P PP + + PP PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPPT 1141
P PPP PP SP PP S PP PPT
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPT 330
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP PP + SP PP + PP S PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPP 280
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
P PPP PP T SP PP S PP S PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPAGGSPPP 297
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 1269 PPPXPPPXXPLPP-AXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP P P PP A P PP + + PP PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 1263 PXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPPT 1141
P PPP PP SP PP S PP PPT
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPT 315
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin protein.
Length = 1346
Score = 32.7 bits (71), Expect = 0.57
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXL 1159
PPP PP PLPP P PP PP L
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGNL 807
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 32.3 bits (70), Expect = 0.75
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSS 1180
PPP PPP +P + T P PP SS
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPPAQQKPSS 185
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPP 1201
PPP PPP P PP S PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPN 1207
PPP PPP P PPA P+
Sbjct: 5 PPPPPPPPPPPPPAASAPPPS 25
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 1269 PPPX--PPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP P PP P PP + P D PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP LPP P PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 1269 PPPX--PPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP P PP P PP + P D PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP LPP P PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPP 1201
PPP PPP P PP S PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPP 1201
PPP PPP +P + T P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPP 178
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPN 1207
PPP PPP P PPA P+
Sbjct: 5 PPPPPPPPPPPPPAASAPPPS 25
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = -1
Query: 1269 PPPX--PPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP P PP P PP + P D PP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP LPP P PP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPP--XHTXXSSXXPPXXLDSXPP 1144
PPP PPP P PP P P + S+ P S PP
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPP 176
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPPT 1141
P PPP P+ T S PP HT PP + PT
Sbjct: 114 PQRPPPPQYDQPSSSTGSSLPPLHTVRYEQLPPPPSNQRTPT 155
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1043 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1097
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1098 VPVRKAPP--PPPR 1109
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1037 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1091
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1092 VPVRKAPP--PPPR 1103
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXS-SXXPPXXLDSXPP 1144
PPP PPP P P + P P T S PP S P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1043 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1097
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1098 VPVRKAPP--PPPR 1109
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1037 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1091
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1092 VPVRKAPP--PPPR 1103
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1037 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1091
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1092 VPVRKAPP--PPPR 1103
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 30.7 bits (66), Expect = 2.3
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = -1
Query: 903 HYPVXXXPVSCXSSRPPXXXXXXXXL-GXXSPXPLPXXIPRPPXELRXTXESXVFPXXPX 727
H P P S + PP SP P P IP PP T + V P P
Sbjct: 1043 HVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIPLPP-----TRGASVGPGPPA 1097
Query: 726 SXLXXGPPXXPPPR 685
+ PP PPPR
Sbjct: 1098 VPVRKAPP--PPPR 1109
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PPP P+ P PP PP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = -1
Query: 813 PXPLPXXIPRPPXELRXTXESXVFPXXPXSXLXXGPPXXPPPR 685
P P+P P PP + + P P + PP P PR
Sbjct: 48 PMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPR 90
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = -1
Query: 867 SSRPPXXXXXXXXLGXXSPXPLPXXIPRPPXELRXTXESXVFPXXPXSXLXXGPPXXPPP 688
SS PP + P+P P PP L P P + GPP PPP
Sbjct: 539 SSIPPPPPIAGLLAANGTNVPIP---PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical protein
C36H8.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPP 1201
PPP PPP P P P PP
Sbjct: 178 PPPRPPPQEPPKPVEQAAPPPPP 200
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical protein
R10E12.1d protein.
Length = 498
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP P P A SP PP T S P
Sbjct: 370 PPRPPP--PRPAAPSVESPIPPPRTQQSMQATP 400
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical protein
R10E12.1c protein.
Length = 846
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP P P A SP PP T S P
Sbjct: 754 PPRPPP--PRPAAPSVESPIPPPRTQQSMQGQP 784
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical protein
R10E12.1b protein.
Length = 882
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP P P A SP PP T S P
Sbjct: 754 PPRPPP--PRPAAPSVESPIPPPRTQQSMQATP 784
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical protein
R10E12.1a protein.
Length = 861
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP P P A SP PP T S P
Sbjct: 733 PPRPPP--PRPAAPSVESPIPPPRTQQSMQATP 763
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PP PPP P P A SP PP T S P
Sbjct: 733 PPRPPP--PRPAAPSVESPIPPPRTQQSMQATP 763
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP + P +P PP + PP PP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP + P +P PP + PP PP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP + P +P PP + PP PP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.3
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -1
Query: 999 PPPXRXPXPXQXXXXXXPXPPXRXXLSPXVXXHYPVXXXPVSCXSSRPPXXXXXXXXLGX 820
PPP R P P P PP R P + P + PP G
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFG-PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 819 XS-PXPLPXXIPRPP 778
P P P P PP
Sbjct: 361 GMYPPPPPSRPPAPP 375
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PP P PP P PP S PP PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPP----PSRFGPPGMGGMPPP 336
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -1
Query: 813 PXPLPXXIPRPPXELRXTXESXVFPXXPXSXLXXGPPXXPPPRXP 679
P P P P PP + P P S + PP PP R P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.3
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -1
Query: 999 PPPXRXPXPXQXXXXXXPXPPXRXXLSPXVXXHYPVXXXPVSCXSSRPPXXXXXXXXLGX 820
PPP R P P P PP R P + P + PP G
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFG-PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 819 XS-PXPLPXXIPRPP 778
P P P P PP
Sbjct: 371 GMYPPPPPSRPPAPP 385
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP PP P PP P PP S PP PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPP----PSRFGPPGMGGMPPP 346
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -1
Query: 813 PXPLPXXIPRPPXELRXTXESXVFPXXPXSXLXXGPPXXPPPRXP 679
P P P P PP + P P S + PP PP R P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PP PPP P P T P PP S P PP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPP 1378
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical protein
ZK354.8 protein.
Length = 483
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 1268 PPPXPPPXXPFLPPRXXTARTXRPTP 1191
PPP PPP P PP P P
Sbjct: 97 PPPPPPPVAPHQPPPQLATSAQPPQP 122
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +2
Query: 677 RGXRGGGXXGGPXHNXDXGXXGKTXLSXVXRSSXGGRGIXXGRGXGXXXPXXXNXXNXXG 856
RG RGGG GG G G R GGRG G G G G
Sbjct: 55 RGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRG-GRGSPRGGRGGAGGMRG 113
Query: 857 GRE---EXHETG 883
G+ E H G
Sbjct: 114 GKTVVVEPHRLG 125
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPPXXLDSXPP 1144
PPP P P PP P PP PP PP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXT-XSPNPPXHTXXSSXXPPXXLDSXPP 1144
P P PP P PP T P PP PP PP
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 1266 PPXPPPXXPLPPAXXTXSPNPP 1201
PP PPP P PPA PP
Sbjct: 512 PPPPPPPPPPPPALEQEISGPP 533
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -1
Query: 1269 PPPXPPPXXPLPPAXXTXSPNPPXHTXXSSXXPP 1168
PPP PPP + P PP T + PP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,495,515
Number of Sequences: 27780
Number of extensions: 189358
Number of successful extensions: 2708
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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