Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_J07
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.28
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.50
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 29 3.5
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.6
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 29 6.1
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.1
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 8.1
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 8.1
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 8.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 8.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 8.1
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 495 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 674
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 675 SNTT 686
+TT
Sbjct: 467 PSTT 470
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 504 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 662
PKT+P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.50
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 194 LYMSVVIGEYEXAIA-KCSEYLKEKKGEVIKEAVKRLIE 307
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 248 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 418
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 419 TVKLINKRDHHALKLI 466
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 558 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 686
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 285 SLITSPFFSFRYSEHLAIAXSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 124
++I P SFRY+ L + SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 555 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 692
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 285 SLITSPFFSFRYSEHLAIAXSYSPMTTLIYSCSASTSSVLGASVALEASAHTAR 124
++I P SFRY+ L + SPM ++ S S S+ V + ++ H+ R
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 542 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 685
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>Z22173-2|CAA80126.1| 327|Caenorhabditis elegans Hypothetical
protein C15H7.4 protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 152 ATLAPSTDDVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGK 316
AT +P+ + L ++ +V G E +A + EKK EV+ + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 188 EQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 367
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 368 IV--KSYFPIQFRVI 406
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 272 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 361
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 401 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 556
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 557 NNRVYFKIMSTEDK 598
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +2
Query: 401 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 556
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 557 NNRVYFKIMSTEDK 598
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +2
Query: 152 ATLAPSTDDVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 331
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 3805 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 3863
Query: 332 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 454
W KDGKEI KS F T ++ + + HA
Sbjct: 3864 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 3900
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +2
Query: 152 ATLAPSTDDVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 331
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 4043 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 4101
Query: 332 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 454
W KDGKEI KS F T ++ + + HA
Sbjct: 4102 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 4138
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +2
Query: 152 ATLAPSTDDVLAEQLYMSVVIGEYEXAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMD 331
A + P ++ IG+ + A S+ LK +GE+ K A K +IE +
Sbjct: 4043 AVVKPVIEETRISNKPQPTKIGQSKQAPPTISQQLKPLQGELGK-AAKFVIEFAGAAPVK 4101
Query: 332 FAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHA 454
W KDGKEI KS F T ++ + + HA
Sbjct: 4102 VT---WLKDGKEI-KSTFRTLITTTPTNSSLHIGRLENSHA 4138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,446,520
Number of Sequences: 27780
Number of extensions: 400537
Number of successful extensions: 1498
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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