Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I24
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.053
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.053
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.053
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 35 0.092
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 35 0.092
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.16
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 34 0.16
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 33 0.21
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.28
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 33 0.28
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 33 0.28
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.37
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.37
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 33 0.37
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.65
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.65
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.65
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.65
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.65
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.65
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.65
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.65
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.65
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 32 0.65
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.86
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.86
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.86
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.86
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.86
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.0
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.0
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.5
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 3.5
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 3.5
Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 4.6
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 4.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.0
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 28 8.0
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.053
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
PP G G P G P G P P PP PPPPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGX--AGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKGG 728
PP G GG P G P G P P PP PPPPP KGG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXX-GGXPXSPGXXTXNPXXPGGGPVXPP 469
PP P G P GG P G P PGG P PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.053
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
PP G G P G P G P P PP PPPPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGX--AGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKGG 728
PP G GG P G P G P P PP PPPPP KGG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGG 783
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXX-GGXPXSPGXXTXNPXXPGGGPVXPP 469
PP P G P GG P G P PGG P PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.053
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
PP G G P G P G P P PP PPPPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGX--AGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKGG 728
PP G GG P G P G P P PP PPPPP KGG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGG 366
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXX-GGXPXSPGXXTXNPXXPGGGPVXPP 469
PP P G P GG P G P PGG P PP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 34.7 bits (76), Expect = 0.092
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXP-XXXPPXKXXPPPP 701
G G P P G G+ G PG G PG PG P P K PP
Sbjct: 198 GPQGAPGVPGEKGPTGEPGKVINGAPPGPPG-PPGPPGPQGPPGPPGKDGQPGKAGPPGL 256
Query: 702 PXXXNKKG 725
P +KG
Sbjct: 257 PGDPGEKG 264
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 558 GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
GPP G GR PG G PG PG P PP + PP PP G
Sbjct: 114 GPP-GPPGRDGRPGAPGRPGN-PGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPG 168
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 34.7 bits (76), Expect = 0.092
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG AG PG PG P + P PP K P PP G
Sbjct: 105 PVGTPGKPGRPGKPGVAG-LPGNPGRPPQAPCDPITPPPCKPCPQGPPGVQGPPG 158
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G+ PG PG P ++ P PP + P PP + G
Sbjct: 97 PQGTPGKPGKPGKPGAPGQ-PGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPG 150
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/75 (26%), Positives = 23/75 (30%), Gaps = 8/75 (10%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--------PGXPGXPXKKXXPXXXPPX 680
G G P P G G PG G PG G P + P P
Sbjct: 144 GPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPA 203
Query: 681 KXXPPPPPXXXNKKG 725
PP PP ++G
Sbjct: 204 VPGPPGPPGQAGQQG 218
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +3
Query: 558 GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
GPP G GR PG G G PG P K+ P PP K P PP G
Sbjct: 96 GPP-GTPGRAGRPGKPGAPG-LNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPG 150
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/68 (25%), Positives = 21/68 (30%)
Frame = +3
Query: 522 RGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPP 701
+G G P P G G PG G+ PG G P + P P
Sbjct: 155 KGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGK-PGPAGPPGENGRNGEPQPGSPGEPGR 213
Query: 702 PXXXNKKG 725
P +G
Sbjct: 214 PGQPGSRG 221
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG AG PG PG P + P PP + P PP G
Sbjct: 96 PAGTPGKPGRPGRPGAAG-LPGNPGRPPAQPCDPITPPPCRPCPQGPPGAPGSPG 149
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG AG PG PG P + P PP + P PP G
Sbjct: 117 PSGAPGKPGRPGRPG-AGGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPG 170
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
G GGG G G G PG PG P PG P P P P P
Sbjct: 99 GSGGGGSCSGCCLPGPAGPSGAPGKPG-RPGRPGAGGLPGNPGRPPAQPCHPITPPPCRP 157
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +1
Query: 472 GXNGP--PPGXXGVXRXXXGGXRGTPXXXXGGPXGGXXGXXGGVXXPXXRGKXPXPXGXR 645
G GP PPG G R P GGP G G GG P G+ P P G R
Sbjct: 148 GRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGG--RPGNPGR-PGPAGPR 204
Query: 646 XKKXXP-XXXPPXKXXPPPPQ 705
+ P + PP P+
Sbjct: 205 GEPGTEYKPGQPGRPGPPGPR 225
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G+ PG PG P P PP K P PP G
Sbjct: 111 PAGVPGKPGKPGRPGAPGQ-PGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPG 164
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G+ PG PG P P PP K P PP G
Sbjct: 111 PAGVPGKPGKPGRPGAPGQ-PGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPG 164
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +3
Query: 570 GXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
G GR PG G PG PG P + P PP PP PP G
Sbjct: 110 GAAGRPGTPGRPGAPGA-PGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPG 161
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.37
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +3
Query: 558 GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKGG 728
G P GG PG AG PG PG P + P PP PP + GG
Sbjct: 238 GAPGTNTVNSPGG--PGPAGP-PGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGG 291
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +3
Query: 558 GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKG 725
GPP G G PG G+ G PG P P PP PP + G
Sbjct: 214 GPP-GPPGPPGNDGQPGAPGQD-GQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDG 267
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G P P G G PG G+ PG PG P PP PP
Sbjct: 205 GDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQ-PGAPGTNTVNSPGGPGPAGPPGPPGPP 263
Query: 705 XXXNKKG 725
G
Sbjct: 264 GQDGSGG 270
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G G P G GR PG G PG PG P PP PP PP
Sbjct: 88 GCAGCCKPGHPGRP-GLPGRNGKPGVPGAPGR-PGTPGRPPIVCEEQDVPPCNPCPPGPP 145
Query: 705 XXXNKKG 725
G
Sbjct: 146 GPQGPTG 152
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPX-KKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G PG PG P P PP K P PP G
Sbjct: 109 PAGAPGKPGKPGRPGAPGT-PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 162
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 603 PGXAGEXPGXPGXPXKKXXPXXXPPXKXX-PPPPPXXXNKKGG 728
PG PG PG P PP PPPPP GG
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPX-KKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G PG PG P P PP K P PP G
Sbjct: 104 PAGAPGKPGKPGRPGAPGT-PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 157
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G PG +GE PG PG P + P P PP PP G
Sbjct: 149 PQGPPGPPGPPGPPGDSGE-PGSPGLPGQDAAP--GEPGPKGPPGPPGAPGAPG 199
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX---PPPPPXXXNKKG 725
P G G+ PG G PG PG P ++ P PP K PP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 603 PGXAGEXPGXPGXPXKKXXPXXXPPXKXX-PPPPPXXXNKKGG 728
PG PG PG P PP PPPPP GG
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 634 GXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
G G P PG PP +P P GG G P P
Sbjct: 97 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGP 133
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 GXNGPPPGXXGVXRXXXGGXRGTPXXXXGGPXG-GXXGXXGGVXXPXXRGK 621
G G PPG G G G P GGP G G G GG+ P G+
Sbjct: 178 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGM-LPKSHGR 227
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 634 GXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
G G P PG PP +P P GG G P P
Sbjct: 377 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGP 413
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 GXNGPPPGXXGVXRXXXGGXRGTPXXXXGGPXG-GXXGXXGGVXXPXXRGK 621
G G PPG G G G P GGP G G G GG+ P G+
Sbjct: 458 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGM-LPKSHGR 507
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPX-KKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G PG PG P P PP K P PP G
Sbjct: 104 PAGAPGKPGKPGRPGAPGT-PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPG 157
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGXAGEXP-GXPGXPXKKXXPXXXPPXKXXPPP 698
PP G G PG G P G PG P P P PPP
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = +2
Query: 521 PGEXGXPPXXXXGAPXGXXGAXXGGXXXRXXGGXARXPXXPXKKXXTPXXXPXXXXPPP 697
PG G PP GAP G G GG G P P P P PPP
Sbjct: 406 PGGYGPPPPGGPGAP-GSYGPPQGG----PGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G PG +GE PG PG P + P P PP PP G
Sbjct: 149 PQGPPGPPGPPGPPGDSGE-PGSPGLPGQDAAP--GEPGPKGPPGPPGAPGAPG 199
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX---PPPPPXXXNKKG 725
P G G+ PG G PG PG P ++ P PP K PP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX---PXXXPPXKXXPP 695
G G P G G PG G PG PG P K PP PP
Sbjct: 206 GQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGA-PGQPGRPGKNAQGGSSRPGPPGPAGPP 264
Query: 696 PPPXXXNKKGG 728
PP GG
Sbjct: 265 GPPGNNGAPGG 275
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG AG PG PG P + P PP K P P
Sbjct: 112 PAGTPGKPGRPGRPGAAG-LPGNPGRPPAQPCEPITPPPCKPCPQGP 157
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG AG PG PG P + P PP K P P
Sbjct: 112 PAGTPGKPGRPGRPGAAG-LPGNPGRPPAQPCEPITPPPCKPCPQGP 157
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXP 662
G G P G G+ G PG AG PG PG P + P
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAP 206
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG AG PG PG P + P PP K P P
Sbjct: 112 PAGTPGKPGRPGRPGAAG-LPGNPGRPPAQPCEPITPPPCKPCPQGP 157
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXP 662
G G P G G+ G PG AG PG PG P + P
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAP 206
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG AG PG PG P + P PP K P P
Sbjct: 112 PAGTPGKPGRPGRPGAAG-LPGNPGRPPAQPCEPITPPPCKPCPQGP 157
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXP 662
G G P G G+ G PG AG PG PG P + P
Sbjct: 159 GAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGAP 206
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
GG GG GG G PG PG SP PG P P G P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAP-GNP 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
GGGGG G G G PG PG P PG P P P P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG-KPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
GG GG GG G PG PG SP PG P P G P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAP-GNP 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
GGGGG G G G PG PG P PG P P P P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG-KPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
GG GG GG G PG PG SP PG P P G P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAP-GNP 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
GGGGG G G G PG PG P PG P P P P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG-KPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
GG GG GG G PG PG SP PG P P G P
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAP-GNP 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
GGGGG G G G PG PG P PG P P P P
Sbjct: 91 GGGGGGGCDGCCNPGPPGPGGSPGKPG-KPGKPGAPGAPGNPGKGASAPCEPVTQPPCQP 149
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 558 GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPPPXXXNKKG 725
GPP G G PG G G PG P K+ P PP K P PP G
Sbjct: 98 GPP-GTPGSAGRPGKPGAPG-LNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPG 152
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/68 (25%), Positives = 22/68 (32%)
Frame = +3
Query: 522 RGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPP 701
+G G P P G G PG G+ PG G P + P P
Sbjct: 157 KGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGK-PGPAGPPGENGNNGEPQPGAPGEPGQ 215
Query: 702 PXXXNKKG 725
P ++G
Sbjct: 216 PGQPGQRG 223
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G+ PG G PG PG P PP PP P G
Sbjct: 107 PDGPPGKNGAPGRPGAPGA-PGFPGRPPAVCEEITEPPCTPCPPGEPGPPGPPG 159
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXPXXXPPXKXXPPP 698
G G P P G G PG AG PG PG ++ P + P
Sbjct: 155 GNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQG 214
Query: 699 PPXXXNKKG 725
PP + G
Sbjct: 215 PPGAPGQPG 223
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G P P G G G AG G PG P K P PP PP
Sbjct: 168 GQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPN-GEPGAPGKDGEKGKGEPGPAGPPGPP 226
Query: 705 XXXNKKG 725
G
Sbjct: 227 GPGGPPG 233
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = +1
Query: 472 GXNGPPPGXXGVXRXXXGGXRGTPXXXXGGPXG--GXXGXXGGVXXPXXRGKXPXPXGXR 645
G GPP G GG RG P GGP G G G G P P P G
Sbjct: 159 GPPGPPGGHGEPGPAGRGGPRGPP--GPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEP 216
Query: 646 XKKXXP 663
+ P
Sbjct: 217 GQPGEP 222
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Frame = +1
Query: 532 RGTPXXXXGGPXGGXXGXXGGVXXPXX----RGKXPXPXGXRXKKXXPXXXPPX-KXXPP 696
RG P P GG G GG P +G P G + P PP PP
Sbjct: 1552 RGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
Query: 697 PPQXXXT 717
PP T
Sbjct: 1612 PPSVEWT 1618
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +3
Query: 561 PPXGXXGRXXGGXXPGXAGEX-PGXP----GXPXKKXXPXXXPPXKXXPPPPP 704
PP G GG P G G P G P + P PP PPPP
Sbjct: 1561 PPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXP 569
GGGGG GG G PG PG P PG P P
Sbjct: 100 GGGGGEAAGGGGGCTGCCNPGPPG-PGGRPGKPGTPGKPGAPGNP 143
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGX-------PXKKXXPXXXPPXK 683
G G GPP G GR PG G PG PG P + P P
Sbjct: 109 GGGGCTGCCNPGPP-GPGGRPGKPGTPGKPGA-PGNPGASGKGAAAPCEPSTPPPCQPCP 166
Query: 684 XXPPPPPXXXNKKG 725
PP PP G
Sbjct: 167 AGPPGPPGPDGTPG 180
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = -2
Query: 642 GXXGXRAFPPXXRXXXPPXX-APXXPXGAPXXXXG-GXPXSPGXXTXNPXXPGG-GPVXP 472
G G A P PP P P G P G P PG +P P G GP P
Sbjct: 144 GASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGP-AGSPAGPSGPGPAGP 202
Query: 471 P 469
P
Sbjct: 203 P 203
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX---PPPPPXXXNKKG 725
P G G+ PG G PG PG P ++ P PP K PP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPG 163
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPP 698
P G G PG +GE PG PG P + P P PP
Sbjct: 149 PQGPPGPPGPPGPPGDSGE-PGSPGLPGQDAAPGEPGPKGPKGPP 192
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +3
Query: 465 FXGXKRAPPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXP-GX 641
F G ++APP +G P PP G P G P P G
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGS 279
Query: 642 PXKKXXPXXXPPXKXXPPPPP 704
P PP + PPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPP 300
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 486 PPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPX 665
PP G P PP G G P AG P K+ P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 341
Query: 666 XXPPXKXXPP-PPPXXXNKKGG 728
PP P PP +GG
Sbjct: 342 RSPPTGSPPTGSPPTGRPPRGG 363
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 642 GXXGXRAFPPXXRXXXPPXXAPXXPXGAPXXXXGGXPXSPGXXTXNPXXPGGGPVXPP 469
G G R PP PP P G+P G P P P G P PP
Sbjct: 224 GFRGKRQAPPAGSPPPPPP-----PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 484 PPPGXXGVXRXXXGGXRGTPXXXXGGPXGGXXGXX--GGVXXPXXRGKXPXPXGXRXKKX 657
PPP G G P G P G GG P G P P R K+
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP--RQKRQ 338
Query: 658 XPXXXPPXKXXP 693
P PP P
Sbjct: 339 APERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +3
Query: 465 FXGXKRAPPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXP-GX 641
F G ++APP +G P PP G P G P P G
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGS 300
Query: 642 PXKKXXPXXXPPXKXXPPPPP 704
P PP + PPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPP 321
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 486 PPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPX 665
PP G P PP G G P AG P K+ P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 362
Query: 666 XXPPXKXXPP-PPPXXXNKKGG 728
PP P PP +GG
Sbjct: 363 RSPPTGSPPTGSPPTGRPPRGG 384
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 642 GXXGXRAFPPXXRXXXPPXXAPXXPXGAPXXXXGGXPXSPGXXTXNPXXPGGGPVXPP 469
G G R PP PP P G+P G P P P G P PP
Sbjct: 245 GFRGKRQAPPAGSPPPPPP-----PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 484 PPPGXXGVXRXXXGGXRGTPXXXXGGPXGGXXGXX--GGVXXPXXRGKXPXPXGXRXKKX 657
PPP G G P G P G GG P G P P R K+
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP--RQKRQ 359
Query: 658 XPXXXPPXKXXP 693
P PP P
Sbjct: 360 APERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +3
Query: 465 FXGXKRAPPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXP-GX 641
F G ++APP +G P PP G P G P P G
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAA---GSPPPPRTGSPPPPPTGS 285
Query: 642 PXKKXXPXXXPPXKXXPPPPP 704
P PP + PPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPP 306
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 486 PPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPX 665
PP G P PP G G P AG P K+ P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 347
Query: 666 XXPPXKXXPP-PPPXXXNKKGG 728
PP P PP +GG
Sbjct: 348 RSPPTGSPPTGSPPTGRPPRGG 369
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 642 GXXGXRAFPPXXRXXXPPXXAPXXPXGAPXXXXGGXPXSPGXXTXNPXXPGGGPVXPP 469
G G R PP PP P G+P G P P P G P PP
Sbjct: 230 GFRGKRQAPPAGSPPPPPP-----PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 484 PPPGXXGVXRXXXGGXRGTPXXXXGGPXGGXXGXX--GGVXXPXXRGKXPXPXGXRXKKX 657
PPP G G P G P G GG P G P P R K+
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP--RQKRQ 344
Query: 658 XPXXXPPXKXXP 693
P PP P
Sbjct: 345 APERSPPTGSPP 356
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXPXXXPPXKXXPPP 698
G G P P G G PG AG PG PG ++ P P
Sbjct: 157 GNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQG 216
Query: 699 PPXXXNKKG 725
PP + G
Sbjct: 217 PPGAPGQPG 225
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG G PG PG P ++ P PP K P P
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG G PG PG P ++ P PP K P P
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG G PG PG P ++ P PP K P P
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G P P G G PG G PG PG P P + P PP
Sbjct: 171 GTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGA-PGEPGRPGDDAPSEPLIPGEPGPQGPP 229
Query: 705 XXXNKKG 725
+ G
Sbjct: 230 GPPGQAG 236
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXP 662
G G P P G G G PG G PG PG P P
Sbjct: 224 GPQGPPGPPGQAGPDGQPGAPGGPGTPGSKG-PPGNPGAPGADGKP 268
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG G PG PG P ++ P PP K P P
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXXPPPP 701
P G G+ PG G PG PG P ++ P PP K P P
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXG-XXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXG 539
GGGGG GG G + G G G S PP P P P G
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXG-XXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXG 539
GGGGG GG G + G G G S PP P P P G
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 643 GXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
G PG PG +P+ PP P P GGP
Sbjct: 187 GGPGAPGNTPSGGAAGPPG--PPGPPGGP 213
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX---PPPPPXXXNKKG 725
P G G+ PG G PG PG P ++ P PP + PP PP G
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSG 163
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = +3
Query: 480 RAPPRXXXXXXXXXRGXXGXPXXXXX-GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKX 656
+ PP +G G P GPP PG GE G PG P +
Sbjct: 200 KGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEM-GPPGPPGPRG 258
Query: 657 XPXXXPPXKXXPP 695
P PP PP
Sbjct: 259 EP--GPPGPFGPP 269
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXK---KXXPXXXPPXKXXPP 695
G G GPP G G PG + PG PG PP P
Sbjct: 438 GAPGGSGAPPPGPPGAYPGNGAPGGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPHPGHPG 497
Query: 696 PPPXXXN 716
PP N
Sbjct: 498 YPPQHMN 504
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = +3
Query: 480 RAPPRXXXXXXXXXRGXXGXPXXXXX-GPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKX 656
+ PP +G G P GPP PG GE G PG P +
Sbjct: 200 KGPPGDDSIGGTGIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEM-GPPGPPGPRG 258
Query: 657 XPXXXPPXKXXPP 695
P PP PP
Sbjct: 259 EP--GPPGPFGPP 269
>Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical
protein W08E3.1 protein.
Length = 160
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 534 GXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXP 644
G P G P G G G PG A PG G P
Sbjct: 119 GMPGMPPGGAPGGLSGAMRGHGGPGMAAMQPGYGGPP 155
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 703 GGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGGPXXXXXGXPXFP 524
GGGGG G G PG PG P PG P GP P P
Sbjct: 93 GGGGGGQCSTCCRPGPPGAGGTPGKPG-RPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKP 151
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX------PPPPPXXXNKK 722
P G G+ PG G PG PG P ++ P PP + PP PP
Sbjct: 74 PAGTPGKPGRPGKPGAPG-LPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDA 132
Query: 723 GG 728
GG
Sbjct: 133 GG 134
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXX-PXXXPPXKXX------PPPPPXXXNKK 722
P G G+ PG G PG PG P ++ P PP + PP PP
Sbjct: 107 PAGTPGKPGRPGKPGAPG-LPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDA 165
Query: 723 GG 728
GG
Sbjct: 166 GG 167
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXXGGXPXSPGXXTXNPXXPGGGPVXP 472
PP P P G G P PG + P GGP P
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGP--PGPFNPSEAPPSGGPTGP 214
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXPXXXPPXKXXPPP 698
G G P P G G PG G PG PG ++ P + PP
Sbjct: 155 GQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPG 214
Query: 699 PPXXXNKKG 725
P + G
Sbjct: 215 PAGGPGQPG 223
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G P P G G PG GE G P + P PP PP
Sbjct: 128 GDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEA----GSPGTRSISSPGPAGPAGPPGPP 183
Query: 705 XXXNKKGG 728
GG
Sbjct: 184 GPDGAPGG 191
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/86 (24%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +3
Query: 471 GXKRAPPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXK 650
G P R RG G G G G+ P PG PG P +
Sbjct: 163 GELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGE 222
Query: 651 KXXP-XXXPPXKXXPPPPPXXXNKKG 725
P + PP PP +G
Sbjct: 223 PGPDGRAGHPGRNGPPGPPGDNGGQG 248
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/86 (24%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +3
Query: 471 GXKRAPPRXXXXXXXXXRGXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXK 650
G P R RG G G G G+ P PG PG P +
Sbjct: 163 GELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGE 222
Query: 651 KXXP-XXXPPXKXXPPPPPXXXNKKG 725
P + PP PP +G
Sbjct: 223 PGPDGRAGHPGRNGPPGPPGDNGGQG 248
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -1
Query: 721 FLFXXXGGGGGXXXXGGXXXGXXFFXGXPGXPGXSPAXPGXXPPXXRPXXPXGG 560
FLF GGGGG GG G G G G P PP GG
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGG--CAPPPPPPACGGGCGGGG 69
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPP 704
G G P P G G PG GE G P + P PP PP
Sbjct: 128 GDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEA----GSPGTRSISSPGPAGPAGPPGPP 183
Query: 705 XXXNKKGG 728
GG
Sbjct: 184 GPDGAPGG 191
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 525 GXXGXPXXXXXGPPXGXXGRXXGGXXPGXAGEX--PGXPGXPXKKXXP 662
G G P G G+ G PG AG PG PG P + P
Sbjct: 202 GPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQPGQDGQP 249
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXXGGXPXSPGXXTXNPXXPGGGPVXPP 469
P P P G P P PG T P P G P P
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
>Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical
protein W09C5.5 protein.
Length = 722
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 643 GXPGXPGXSPAXPGXXPPXXRPXXPXGGP 557
G PG PG P+ P PP P P G P
Sbjct: 149 GAPGAPGAQPSRPPILPPI--PTTPTGFP 175
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Frame = +3
Query: 558 GPPX--GXXGRXXGGXXPGXAGEXPGXPGX----PXKKXXPXXXPPXKXXPPPPPXXXNK 719
GPP G G+ PG G PG PG P + P P PP PP
Sbjct: 109 GPPGVAGNPGKPGKPGKPGAPGN-PGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGP 167
Query: 720 KG 725
G
Sbjct: 168 AG 169
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 593 PPXXPXXPPWGPPXXXXGVPRXPP 522
PP P PP G P G P PP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 593 PPXXPXXPPWGPPXXXXGVPRXPP 522
PP P PP G P G P PP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPP 479
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 564 PXGXXGRXXGGXXPGXAGEXPGXPGXPXKKXXPXXXPPXKXXPPPPPXXXNKKG 725
P G G PG AG PG G K PP P PP ++G
Sbjct: 182 PSGPEGEAGYDGEPG-AGGWPGQRGENAKSYRNFPGPPGPPGPVGPPGDSGERG 234
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 594 PPXXAPXXPXGAPXXXXG-GXPXSPGXXTXNPXXPG-GGPVXPP 469
PP P P G P G P +PG T P PG G PP
Sbjct: 212 PP--GPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPP 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,109,566
Number of Sequences: 27780
Number of extensions: 251894
Number of successful extensions: 2100
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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