Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_I22
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   5.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   5.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   5.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   6.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   8.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 801 YTRIYGTLTFWDYELDFP 748
           YT +  T+ ++DY  DFP
Sbjct: 288 YTNLSMTMKYYDYGADFP 305


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 801 YTRIYGTLTFWDYELDFP 748
           YT +  T+ ++DY  DFP
Sbjct: 288 YTNLSMTMKYYDYGADFP 305


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 421 CKLCLTLDG*CCYFIVFSIAVLQL 350
           CKL LT D  CC   + ++  + L
Sbjct: 109 CKLWLTCDVLCCTASILNLCAIAL 132


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 421 CKLCLTLDG*CCYFIVFSIAVLQL 350
           CKL LT D  CC   + ++  + L
Sbjct: 109 CKLWLTCDVLCCTASILNLCAIAL 132


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 421 CKLCLTLDG*CCYFIVFSIAVLQL 350
           CKL LT D  CC   + ++  + L
Sbjct: 109 CKLWLTCDVLCCTASILNLCAIAL 132


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -1

Query: 242 SSFSLVVLGTFPLIVMFLLAISLAIRILCL 153
           +S ++ +LGT+   +MF++A S+   IL L
Sbjct: 287 TSDAVPLLGTYFNCIMFMVASSVVSTILIL 316


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 785 PYILV*CKIIIFKSINRC 838
           P IL  CK I  +SIN C
Sbjct: 177 PLILGSCKCIYVQSINLC 194


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,517
Number of Sequences: 438
Number of extensions: 5630
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)