Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I19
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0308 + 2434642-2434736,2435176-2435245,2435435-2435566,243... 52 8e-07
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514... 49 6e-06
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 46 5e-05
03_02_0334 + 7570568-7570709,7571622-7571844,7572178-7572257,757... 43 4e-04
03_06_0526 - 34515218-34515372,34515454-34515567,34515651-345157... 40 0.003
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 38 0.014
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 35 0.100
12_02_1106 - 26134960-26135115,26135901-26136207,26136421-26137004 31 0.93
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 31 1.6
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743... 31 1.6
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 29 5.0
04_04_1360 + 32889597-32890343 29 5.0
01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136 29 5.0
>05_01_0308 +
2434642-2434736,2435176-2435245,2435435-2435566,
2435659-2435722,2435786-2435855,2435952-2436036,
2437572-2437628,2437894-2438010,2438267-2438337,
2438703-2439045
Length = 367
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +1
Query: 547 VVNGTTGMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTD 726
++ G TG W + L LS++IL ++FS K ELGSG+G G+ L + V +TD
Sbjct: 138 MLEGDTGCSLWPSGLFLSEFILSYPKIFSRKCCFELGSGVGLVGVCL-NYVSASKVILTD 196
Query: 727 CHEEVLXVLCENVDIN 774
L + N+++N
Sbjct: 197 GDASTLENMKGNMEMN 212
>07_03_1453 -
26649922-26650064,26650148-26650244,26651260-26651418,
26651478-26651603
Length = 174
Score = 48.8 bits (111), Expect = 6e-06
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +1
Query: 577 WEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDCHEEVL 744
W A++++ ++ + E ++ELGSG+G TGI ++FC K V +TD ++EVL
Sbjct: 98 WPGAVLMNTYLSEHPETVKDHSIIELGSGVGITGILCSRFC--KEVVLTDHNDEVL 151
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 559 TTGMRTWEAALMLSDWIL---CNKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDC 729
+ G++ W+AAL+L+D++L F+ +E+G+G G G+ LA+ K + +TD
Sbjct: 89 SVGLQVWKAALLLTDFVLHKSFTSSEFNGVTAIEIGAGTGLVGLALARVA--KKIFITDR 146
Query: 730 HEEVLXVLCENVDIN 774
++L NV +N
Sbjct: 147 GSDILDNCLANVQLN 161
>03_02_0334 +
7570568-7570709,7571622-7571844,7572178-7572257,
7572869-7572929,7573670-7573796
Length = 210
Score = 42.7 bits (96), Expect = 4e-04
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 499 SNDLNNIIIMKETKNMVVNGTTGMRT-WEAALMLSDWILCNKELFSSKDVLELGSGIGFT 675
S +LN+I+ N TTG+ W + +L+ + + + ++F SK VLELGSG G
Sbjct: 128 SLELNDIV----ASNRYNIDTTGLVCCWPSEEVLAYYCINHSDMFRSKKVLELGSGYGLA 183
Query: 676 GITLAKFCEPKSVTMTDCHEEVL 744
G+ +A + V ++D + +V+
Sbjct: 184 GLAIAASTDADEVVISDGNPQVV 206
>03_06_0526 -
34515218-34515372,34515454-34515567,34515651-34515722,
34515832-34515974,34516457-34516635,34517798-34517874,
34517994-34518150
Length = 298
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 577 WEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTD 726
W + +DW++ NK + + +LELGSG G I L K + +T TD
Sbjct: 111 WPGTFLFADWLVKNKSILHGRRILELGSGTGALAIFLRKAFQ-VDITTTD 159
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 565 GMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDC--HEE 738
GM W +++L++++ + F++ V+ELG+G G+ AK VT+TD + E
Sbjct: 59 GMFVWPCSVILAEYVWQQRSRFTASTVVELGAGTSLPGLVAAKV--GADVTLTDIAHNTE 116
Query: 739 VLXVLCENVDINFPSQCKNRSS 804
VL + + +N + N+S+
Sbjct: 117 VLNNIRQVCGLNNVNCTLNKST 138
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 34.7 bits (76), Expect = 0.100
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 562 TGMRTWEAALMLSDWILCNKELFSSKDVLELGSG-IGFTGITLAKFCEPKSVTMTDCHEE 738
TG+ WE+A + + N + + K VLELG G G + A + V TD E
Sbjct: 332 TGLMLWESAQFMCSVLAENPSILAGKRVLELGCGSAGICSMVAATVAQ--FVVATDGDAE 389
Query: 739 VLXVLCENVDIN 774
L +L EN N
Sbjct: 390 SLDLLRENTASN 401
>12_02_1106 - 26134960-26135115,26135901-26136207,26136421-26137004
Length = 348
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 622 ELFSSK-DVLELGSGIGFTGITLAKFCEPKSVTMTD 726
+L+S K V+++G G GFT + + K +P++VT+ D
Sbjct: 117 DLYSRKLRVVDVGGGTGFTTLGIVKRVDPENVTLLD 152
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 335 ITGLLNVKSTNSSCHDHVISFTESGSI*KFVQ 240
+ L+ S++ SCH H+I E+ +I KFV+
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVE 383
>02_05_0856 -
32272757-32273494,32273578-32273866,32273961-32274312,
32275232-32275850
Length = 665
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 481 YRHYVISNDLNNIIIMKETK---NMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVLE 651
Y H I NDL + +K+ K N++V G + WE AL L W+ + + K VLE
Sbjct: 339 YEHPHI-NDLAYMPAVKDGKFGFNLLVGGFISPKRWEEALPLDAWVPGDDIIPVCKAVLE 397
Query: 652 LGSGIGFTG 678
+G G
Sbjct: 398 AYCDLGTRG 406
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 628 FSSKDVLELGSGIG-FTGITLAKFCEPKSVTMTDCHEEVLXVLCENVD---INFPSQCKN 795
+ K VLELG+GIG FTG LAK E V D E V+ EN++ N C +
Sbjct: 57 YKGKSVLELGAGIGRFTG-ELAK--EAGHVLALDFIESVIK-KNENINGHHKNITFMCAD 112
Query: 796 RSSDGXTYELNNV 834
+S T E N++
Sbjct: 113 VTSPDLTIEDNSI 125
>04_04_1360 + 32889597-32890343
Length = 248
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 562 TGMRTWEAALMLSDWIL-C-NKELFSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDCHE 735
TG W+++L+L+ + C + VLELG+G G GI +TD
Sbjct: 43 TGSWLWDSSLVLASHLASCVHHHHLRGATVLELGAGTGLPGIAAVACLGAARCVLTDV-R 101
Query: 736 EVLXVLCENVDIN 774
+L L N D N
Sbjct: 102 PLLPGLRANADAN 114
>01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136
Length = 505
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 481 YRHYVISNDLNNIIIMKETK---NMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVLE 651
Y H I NDL + +K K N++V G + WE AL L W+ + + K VLE
Sbjct: 148 YEHPHI-NDLAYMPAVKGGKFGFNLLVGGFISPKRWEEALPLDAWVPGDDIIPVCKAVLE 206
Query: 652 LGSGIGFTG 678
+G G
Sbjct: 207 AYRDLGTRG 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,413,972
Number of Sequences: 37544
Number of extensions: 316027
Number of successful extensions: 676
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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