Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I19
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical pr... 53 3e-07
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 45 8e-05
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 38 0.007
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 33 0.27
AF106581-6|ABC48242.1| 386|Caenorhabditis elegans Hypothetical ... 31 1.5
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF099914-7|AAC68762.1| 220|Caenorhabditis elegans Hypothetical ... 29 4.5
>Z12017-8|CAA78050.3| 371|Caenorhabditis elegans Hypothetical
protein R08D7.4 protein.
Length = 371
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +1
Query: 331 VIKKYPISTELSRIFLKKLINCIEPVQEV-HDNLYAELCRAMNNSAIEDYCYRHYVISND 507
++ + I + LK LI+ ++ V D+++ L M E Y R Y+
Sbjct: 87 IVTSHEIRYKFQINVLKNLISELQANNVVVPDSMFDRLGSLMGMKEGE-YVERVYLTDGG 145
Query: 508 LNNIIIMKETKNMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITL 687
+ E N + GTTG+ W+A+ L++ ++ +LELGSG G +GI +
Sbjct: 146 DKVLAKFSEAVNQLSMGTTGLSVWQASCDLANLFRLIPSEYNR--ILELGSGCGVSGIAI 203
Query: 688 AKFCEPKSVTMTDCHEEVLXVLCENVDIN 774
AK VT+TD + VL +L EN+ N
Sbjct: 204 AKM-NDCCVTLTDYDDNVLNLLEENIAKN 231
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 44.8 bits (101), Expect = 8e-05
Identities = 37/102 (36%), Positives = 51/102 (50%)
Frame = +1
Query: 469 EDYCYRHYVISNDLNNIIIMKETKNMVVNGTTGMRTWEAALMLSDWILCNKELFSSKDVL 648
E+Y R +ND + +II +ET V G W++ALM + + F K VL
Sbjct: 5 EEYA-RVISFNNDHDELIIYQETVTDV-----GGVIWDSALMTIHYFFKYPKPFEGKKVL 58
Query: 649 ELGSGIGFTGITLAKFCEPKSVTMTDCHEEVLXVLCENVDIN 774
ELGSG G GI LA V +TD E L ++ +NV+ N
Sbjct: 59 ELGSGTGVGGIALAAL--GADVIITDLPER-LALIEKNVEAN 97
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +1
Query: 577 WEAALMLSDWILCNKELFSSKDVLELGSG-IGFTGITLAKFCEPKSVTMTDCH---EEVL 744
W A + SD++ N+EL K VLE+G+G G G+T AK +V MTD H E L
Sbjct: 13 WPCAQVFSDFLCSNQELIEDKLVLEIGAGATGVCGLTTAKL-GAANVWMTD-HPKLEAAL 70
Query: 745 XVLCENVDIN 774
L N++ N
Sbjct: 71 ETLQRNIEAN 80
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 529 KETKNMVVNGTT------GMRTWEAALMLSDWILCNKELFSSKDVLELGSGIGFTGITLA 690
KE +NM + T G + WE + L D+I N+ LF+ K VLELG G I A
Sbjct: 35 KELENMETSDITVHKYEGGFKIWECTVDLCDYIEENQTLFAGKSVLELGCGAALPSILTA 94
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 628 FSSKDVLELGSGIGFTGITLAKFCEPKSVTMTDCHEEVLXVLCENVDIN 774
F K VLELGSG G GI LA V +TD E L ++ +NV+ N
Sbjct: 13 FEGKKVLELGSGTGVGGIALAAL--GADVIITDLPER-LALIEKNVEAN 58
>AF106581-6|ABC48242.1| 386|Caenorhabditis elegans Hypothetical
protein VC5.6 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 391 NCIEPVQEVHDNLYAEL---CRAMNNSAIEDYCYR 486
+CIE Q + L+ EL C+ + +S EDYC+R
Sbjct: 300 DCIEFCQTIRQELFRELNAVCKQLCSSNSEDYCFR 334
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 643 VLELGSGIGFTGITLAKFCEPKSVTMTDCHEEVLXVLCENVDIN 774
++++ + +G+ +T CE K V D ++E+L L + +N
Sbjct: 196 IVDMYASLGYYTLTFLVSCEAKQVVAIDWNDEILESLIRSAQVN 239
>AF099914-7|AAC68762.1| 220|Caenorhabditis elegans Hypothetical
protein C40A11.7 protein.
Length = 220
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 564 CGTINNHILRFLHNYNIIKIIADNIVPVTIVFYST 460
C INN I + ++ +++IIA PV ++ Y T
Sbjct: 98 CEPINNQIRTYRSSHELLQIIASTKKPVVVINYIT 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,759,678
Number of Sequences: 27780
Number of extensions: 314769
Number of successful extensions: 794
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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