Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_I19
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   8.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 IQSKTC*HKISIMSNLANTILVALARKLFRGCTNFH 255
           ++S  C H + ++ ++A + L AL   ++ G  N H
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVH 96


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 463 HCYSLLDTIQHIDYREPP 410
           H +    ++QH+ YR+PP
Sbjct: 353 HHHHQTQSLQHLHYRQPP 370


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 289 TTSLVSQNRAQYENLYNL*KAFELGLPILCSL 194
           + S   QNR+Q E+L+NL      GL IL  L
Sbjct: 24  SASYPPQNRSQEEDLWNL-ATDRAGLAILLFL 54


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 331 QDFSMLNPQTVPATTTS 281
           Q FS  NP T+ A TTS
Sbjct: 17  QLFSSANPGTIQACTTS 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,689
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)