Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I18
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 174 4e-43
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 167 5e-41
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 155 3e-37
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 155 3e-37
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 151 2e-36
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 126 1e-28
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 125 2e-28
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 125 2e-28
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 125 2e-28
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 125 2e-28
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 125 2e-28
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 125 2e-28
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 125 2e-28
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 116 1e-25
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 114 4e-25
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 101 3e-21
AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane hel... 31 4.2
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 174 bits (423), Expect = 4e-43
Identities = 90/177 (50%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
Frame = +2
Query: 299 LASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVV 475
LA+ + ++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+
Sbjct: 23 LAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVL 82
Query: 476 KAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMV 655
KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 656 AESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
AE+++I RETY +I+M+RS NG +V SP GG+DI VA P L+ +DI +G+
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGI 199
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 167 bits (406), Expect = 5e-41
Identities = 87/169 (51%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Frame = +2
Query: 323 RVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGG 499
++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+KAQILAGG
Sbjct: 3 QLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGG 62
Query: 500 RGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKR 679
RGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMVAE+++I R
Sbjct: 63 RGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISR 122
Query: 680 ETYFSIVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
ETY +I+M+RS NG +V SP G DI VA P L+ +DI +G+
Sbjct: 123 ETYLAILMDRSCNGPVLVGSPQGRSDIEEVAASNPELIFKEQIDIFEGI 171
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 155 bits (375), Expect = 3e-37
Identities = 78/146 (53%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
Frame = +2
Query: 392 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 568
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 569 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 748
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 749 GMDIXAVAEKXPHLVKTVPVDILKGL 826
G+DI VA P L+ +DI +G+
Sbjct: 126 GVDIEEVAASNPELIFKEQIDIFEGI 151
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 155 bits (375), Expect = 3e-37
Identities = 78/146 (53%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
Frame = +2
Query: 392 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 568
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 569 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 748
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 749 GMDIXAVAEKXPHLVKTVPVDILKGL 826
G+DI VA P L+ +DI +G+
Sbjct: 126 GVDIEEVAASNPELIFKEQIDIFEGI 151
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 151 bits (367), Expect = 2e-36
Identities = 74/129 (57%), Positives = 93/129 (72%)
Frame = +2
Query: 440 ALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQT 619
A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQT
Sbjct: 1 AAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQT 60
Query: 620 PKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKT 799
PKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+DI VA P L+
Sbjct: 61 PKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFK 120
Query: 800 VPVDILKGL 826
+DI +G+
Sbjct: 121 EQIDIFEGI 129
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 126 bits (303), Expect = 1e-28
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P V P+DI +G+
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAVIKEPIDIEEGI 214
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 60 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 119
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 120 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 179
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 180 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGI 223
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGI 214
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGI 192
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGI 214
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGI 192
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 14 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 73
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 74 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 133
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 134 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGI 177
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 125 bits (302), Expect = 2e-28
Identities = 65/164 (39%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Frame = +2
Query: 338 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 514
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 515 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 694
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 695 IVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
I MERSF G ++ S GG++I VA + P + P+DI +G+
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGI 214
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 116 bits (279), Expect = 1e-25
Identities = 60/153 (39%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +2
Query: 371 DLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFDNGFKGGVHL 547
+LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG F++G KGGV +
Sbjct: 2 ELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKI 61
Query: 548 TKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAA 727
+ ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+I MERSF G
Sbjct: 62 VFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPV 121
Query: 728 IVASPAGGMDIXAVAEKXPHLVKTVPVDILKGL 826
++ S GG++I VA + P + P+DI +G+
Sbjct: 122 LIGSSHGGVNIEDVAAETPEAIIKEPIDIEEGI 154
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 114 bits (275), Expect = 4e-25
Identities = 54/121 (44%), Positives = 81/121 (66%)
Frame = +2
Query: 464 EYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVN 643
+ V+KAQ+LAGGRGKG F++G KGGV + + ++ ++ MIG KL TKQT ++G + N
Sbjct: 24 DVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICN 83
Query: 644 KVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIXAVAEKXPHLVKTVPVDILKG 823
+V+V E +RE YF+I MERSF G ++ S GG++I VA + P + P+DI +G
Sbjct: 84 QVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEG 143
Query: 824 L 826
+
Sbjct: 144 I 144
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 101 bits (242), Expect = 3e-21
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +2
Query: 575 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGM 754
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+
Sbjct: 5 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGV 64
Query: 755 DIXAVAEKXPHLVKTVPVDILKGL 826
DI VA P L+ +DI +G+
Sbjct: 65 DIEEVAASNPELIFKEQIDIFEGI 88
>AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 31.5 bits (68), Expect = 4.2
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -1
Query: 684 VSLLIFTLSATITLFTKIPSLGVCLVISLFPIIFLAKSTILSRFFVR*TPPLNP 523
+S + TLSA I + T G C+ I ++P LA + L+ F+ TP LNP
Sbjct: 233 LSKALSTLSAHIIVVTLF--FGPCIFIYVWPFSSLASNKTLAVFYTVITPLLNP 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,793,860
Number of Sequences: 237096
Number of extensions: 2081783
Number of successful extensions: 2988
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -