Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I16
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 35 0.014
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 30 0.40
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 30 0.40
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 29 0.70
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 29 1.2
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 28 2.1
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 2.1
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 27 2.8
SPBP35G2.02 |||DUF1000 family protein|Schizosaccharomyces pombe|... 27 2.8
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.7
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 26 6.5
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 6.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 8.6
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 35.1 bits (77), Expect = 0.014
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Frame = +1
Query: 106 VVTGARGFLGSRVVDYLLSEESPIKVT---ELVITGSQ----LPSPRDDPRVKLLAVDL- 261
++TG GF+GS +DY + + T +L + L + P + L +DL
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 262 TSPDAADRLVQHDTDVFFHMAAVVSGHAEAEFD-------YGLKVNFEATKALLEAARHR 420
T+ + + D+++ + +++ AE+ D Y K N +T+ LLE R
Sbjct: 73 TNYKFLYQFMVEDSEI-NKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRIL 131
Query: 421 VPS-------LRFVFTSAVAVFG-GDLPPVVDDITAVMPQNTYGTAKAMSELLVNDY 567
+ L FV S V+G D VD+ + + P + Y +KA +L++ Y
Sbjct: 132 LGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVDLIIQSY 188
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 30.3 bits (65), Expect = 0.40
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 11/168 (6%)
Frame = +1
Query: 103 VVVTGARGFLGSRVVDYLLSEESPIKVTELVITGSQLPSPRDD----PRVKLLAVDLTSP 270
V+VTG G++GS LL + + + + + R + +V VDL
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLDE 68
Query: 271 DAADRL-VQHDTDVFFHMAAV--VSGHAEAEFDYGLKVNFEATKALLEAARHRVPSLRFV 441
A D++ + H A + V + Y K N T L+E + + FV
Sbjct: 69 PALDKVFANQNISAVIHFAGLKAVGESVQVPLSY-YKNNISGTINLIECMK-KYNVRDFV 126
Query: 442 FTSAVAVFGGDL-PPVVDDITAVMPQ---NTYGTAKAMSELLVNDYSR 573
F+S+ V+G P I P+ + YG K E ++ D ++
Sbjct: 127 FSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETK 174
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 30.3 bits (65), Expect = 0.40
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Frame = +1
Query: 103 VVVTGARGFLGSRVVDYLLSEESPIKVT-ELVITGSQL--PSPRDDPRVKLLAV-DLTSP 270
V+VTG GF+G+ V + LL ++ T + +L +P +++ + V D+++
Sbjct: 6 VLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIRLNPGLKDKIEFVIVKDVSAS 65
Query: 271 DAADRLVQHDTDVFFHMAA--VVSGHAEAEFDYGLKVNFEATKALLEAARHRVPSLRFVF 444
+A D +++ D ++ H+A+ V + + L + T +LEAA+ R V
Sbjct: 66 NAFDGVLK-DVELICHIASPFFVENVTDNKSQL-LDPAVKGTLGILEAAQGVKSIKRIVI 123
Query: 445 TSAVAVFG 468
TS+ A G
Sbjct: 124 TSSFAAVG 131
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 29.5 bits (63), Expect = 0.70
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 97 MKVVVTGARGFLGSRVVDYLL 159
M++ VTGA GF+GS +V LL
Sbjct: 1 MRIFVTGAAGFIGSEIVRQLL 21
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 103 VVVTGARGFLGSRVVDYLLSEESPIKVTELVITGSQ 210
V +TGA G+LG ++ L++ S +KV LV S+
Sbjct: 1007 VFLTGANGYLGVFILRDLMTRSSNLKVIALVRASSE 1042
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 27.9 bits (59), Expect = 2.1
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = +1
Query: 103 VVVTGARGFLGSRVVDYLLSEESPIKVT---ELVITGSQLPSPRDDPRVKLLAV-DLTSP 270
V++TG GF+ S + LLS+ ++ T + + G P + +V+ + V D +P
Sbjct: 5 VLITGITGFVASHSAEALLSQGYRVRGTYRFQEKLDGLLKNRPEWEKKVEFVQVPDCRAP 64
Query: 271 DAADRLVQHDTDVFFHMAAVVSGHAE---AEFDYGLKVNFEATKALLEAARHRVPSLRFV 441
+A + D H A V + E + L + + + L AA RFV
Sbjct: 65 NAYVEAAK-GVDYVIHAATEVHSNLEPPRKDPHELLHIAIQGCENALIAAAQEPKVKRFV 123
Query: 442 FTSAVAVFGG 471
+ S+ A G
Sbjct: 124 YISSEAALKG 133
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 878 PATVYKASTXSFTDTQIPGKVTHLQRPNDALAMLPRAQYSSLP 750
PA++ S+T P + T+ Q PN+ YSS P
Sbjct: 79 PASINSRRVASYTVQSSPSRTTYRQLPNEPQNSAAYTTYSSFP 121
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.8
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 12/166 (7%)
Frame = +1
Query: 103 VVVTGARGFLGSRVVDYLLSEESPIKVTELVITGSQLPSPRDD----PRVKLLAVDLTSP 270
++VTG G++GS V L++ + + + + R + +K +DL
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDK 67
Query: 271 DAADRLVQ-HDTDVFFHMAAV--VSGHAEAEFDYGLKVNFEATKALLEAAR-HRVPSLRF 438
+ ++ H AA+ V + +Y N T LL R HRV ++
Sbjct: 68 EGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEY-YDNNICGTITLLNVMREHRVKTV-- 124
Query: 439 VFTSAVAVFGG----DLPPVVDDITAVMPQNTYGTAKAMSELLVND 564
VF+S+ V+G D + + P N YG K E ++ D
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKD 170
>SPBP35G2.02 |||DUF1000 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -2
Query: 807 PKTQRCFGNVAACTIFFTTTRGLDNHNSCSXXXXXXXXTPFRGSP 673
P R + N+ IFFT + G D+ + PF+G P
Sbjct: 136 PVKTRLYQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDP 180
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -3
Query: 611 VGTLSIRPSTKPRLE*SLTRSSLIALAVPYVFWGMTAVMSSTTGGRSPPKTATALVKTKR 432
+ TLS+ PS+ P S + SS +A +V YV + SST + V +
Sbjct: 156 ISTLSMSPSSTPVFSPSASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSE 215
Query: 431 RLGTRCLAASRRAFVAS 381
L + + ++ A+ +S
Sbjct: 216 TLTSVSITSTESAYTSS 232
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 869 VYKASTXSFTDTQIPGKVTHLQRPNDALAMLPRAQYSSLPLEDWITTTLAREAQGTRPXL 690
V A + S DT +T + + + +L +Q+SSLP ED T ++ E R +
Sbjct: 421 VSNAGSNSDVDTSAEFSITE-RESLEFIDVLSGSQFSSLPTEDSSTISMNLEFSFPRVLV 479
Query: 689 H 687
H
Sbjct: 480 H 480
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 799 PTMLWQCCRVHNILHYHSR 743
P ++W CC I H+ SR
Sbjct: 63 PDIIWSCCHYKIIQHFRSR 81
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 166 ESPIKVTELVITGSQLPSPRDDPRVKLLAVDLTSPDAADRLVQ 294
E P++ TE + + S + D+P L++ L+SPD ++V+
Sbjct: 1572 EFPLQPTEHMFSDSNVIIREDEPS-SLISFTLSSPDYLSKMVE 1613
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,702,728
Number of Sequences: 5004
Number of extensions: 73256
Number of successful extensions: 204
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -