Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_I11
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447           31   1.0  
07_03_0804 - 21639016-21639231,21639379-21639555,21640120-216405...    29   4.0  
11_06_0757 + 26964983-26965048,26965470-26965874,26966921-269678...    29   5.3  
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367...    29   7.1  
07_03_0805 + 21648041-21649117,21649451-21649462                       28   9.3  
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193     28   9.3  

>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
          Length = 420

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 691 RTLWNLFLIPCSITGTGYSNKIRRQLIERRAHKTGWRRVKSTSSGT 554
           RTL       C I G G+  +   Q+  RR HK  WR VK  ++ T
Sbjct: 23  RTLLESDRYVCEICGQGFQREQNLQM-HRRRHKVPWRLVKRPAAAT 67


>07_03_0804 -
           21639016-21639231,21639379-21639555,21640120-21640588,
           21640608-21641218
          Length = 490

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 557 HEDWPSSSPDLNPTWTSFVLR*TTGRAD 474
           H DWP    D    W  F  R  TGR D
Sbjct: 112 HWDWPEVDGDRASAWAGFAARRVTGRFD 139


>11_06_0757 +
           26964983-26965048,26965470-26965874,26966921-26967814,
           26972063-26972512,26973013-26973637,26994014-26994651,
           26994967-26995032
          Length = 1047

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 281 KTFIIHIHIPSQVINSVTC 337
           K+FIIH+H+P+  ++S+ C
Sbjct: 750 KSFIIHLHLPAASVSSLEC 768


>03_01_0480 -
           3676529-3676687,3676767-3676931,3677044-3677220,
           3678170-3678273,3678700-3678843,3679831-3679898,
           3680059-3680162,3680759-3680767,3681572-3681657,
           3681918-3683373
          Length = 823

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 460 NTGLQSARPVVYRSTNEVHVGFKS-GLEEGQSSCRMKSI 573
           +TG Q  +     STN VH   K+   E+   SC MK+I
Sbjct: 642 STGWQITKAATENSTNAVHTPMKTKWWEKNMKSCNMKNI 680


>07_03_0805 + 21648041-21649117,21649451-21649462
          Length = 362

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 557 HEDWPSSSPDLNPTWTSFVLR*TTGR 480
           H DWP    D    W +F  R  TGR
Sbjct: 113 HWDWPEVDGDRASAWAAFAARSVTGR 138


>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
          Length = 476

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -2

Query: 691 RTLWNLFLIPCSITGTGYSNKIRRQLIERRAHKTGWR-RVKSTSSGTKTGPPP 536
           RTL       C I G G+      QL  RR H   W+ R +  + G   G PP
Sbjct: 73  RTLLATNRFVCEICGKGFQRDQNLQL-HRRGHNLPWKLRQRGGAGGGGGGEPP 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,801,518
Number of Sequences: 37544
Number of extensions: 531974
Number of successful extensions: 1183
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)