Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I03
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.018
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.018
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.024
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.024
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.024
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.13
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 34 0.17
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 34 0.17
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 34 0.17
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.52
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 0.91
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 31 1.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 31 1.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.6
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.8
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 30 2.8
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40797-7|AAB37546.1| 195|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.8
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.4
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.5
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.5
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.5
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.5
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 8.5
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 852 LXPPGGXPPPGXXPXPPGGXGCPXPP 929
+ PP PPPG P PPG G P PP
Sbjct: 295 MWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 550 PPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFGGXXPP 720
PP P P P P G++ P PPP G PP G PP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPP 319
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 873 PPPGXXPXPPGGXGCPXPPXYP 938
PPP P PP G G PP P
Sbjct: 366 PPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFG 705
PP G P PP P P G G P PPP PP G
Sbjct: 278 PPTPG--MTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG----PPGMG 331
Query: 706 GXXPP 720
G PP
Sbjct: 332 GMPPP 336
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Frame = +3
Query: 858 PPG--GXPPPGXXPXP----PGGXGCPXPPXYP 938
PPG G PPP P P PGG P PP YP
Sbjct: 327 PPGMGGMPPP---PPPGMRYPGGMPPPPPPRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.018
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 852 LXPPGGXPPPGXXPXPPGGXGCPXPP 929
+ PP PPPG P PPG G P PP
Sbjct: 305 MWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 550 PPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFGGXXPP 720
PP P P P P G++ P PPP G PP G PP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPP 329
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 873 PPPGXXPXPPGGXGCPXPPXYP 938
PPP P PP G G PP P
Sbjct: 376 PPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFG 705
PP G P PP P P G G P PPP PP G
Sbjct: 288 PPTPG--MTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG----PPGMG 341
Query: 706 GXXPP 720
G PP
Sbjct: 342 GMPPP 346
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Frame = +3
Query: 858 PPG--GXPPPGXXPXP----PGGXGCPXPPXYP 938
PPG G PPP P P PGG P PP YP
Sbjct: 337 PPGMGGMPPP---PPPGMRYPGGMPPPPPPRYP 366
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 858 PPGGXPP--PGXXPXPPGGXGCPXPPXYP 938
PPGG PP G P PP GCP PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
PPGG PPP P P G G P PP P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG K PPP P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 PP--GGXLXFPPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPX 700
PP GG PP G P I P PP GG PPPP G PP
Sbjct: 720 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPP 776
Query: 701 LGG 709
GG
Sbjct: 777 PGG 779
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 532 GGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFGGX 711
GG PP G PP P P GG+ PP PP GG
Sbjct: 701 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 712 XPP 720
PP
Sbjct: 759 PPP 761
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 527 PPGGXLXFPPXXGFPXXKIXXXXXPXG-PPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXL 703
PPGG PP G P P G PP GGF PPPP P +
Sbjct: 747 PPGG---LPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 704 GGXXPP 721
PP
Sbjct: 801 PDYLPP 806
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 926 GXGATXXPXGGGXPPRXGXPP--GGXKXXPPP 837
G + P GG PP G PP GG PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG PPP P
Sbjct: 753 PISGGPPPPP-PPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -3
Query: 707 PPXXGGNFXXXXPXGGGALGXKTPPXXPXXGXGAXXGXXXXKFXXGGXPXLGGNXXPPP 531
PP GG P G + PP P G G GG P + G PPP
Sbjct: 707 PPITGG---PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA--PXPKXGXXGGVFXPRAPP-PXGXXXQKFPP 696
PPGG PP G PP P + P P GG P PP P G PP
Sbjct: 731 PPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 697 XFGGXXPP 720
G P
Sbjct: 788 PPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 858 PPGGXPP--PGXXPXPPGGXGCPXPPXYP 938
PPGG PP G P PP GCP PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
PPGG PPP P P G G P PP P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG K PPP P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 PP--GGXLXFPPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPX 700
PP GG PP G P I P PP GG PPPP G PP
Sbjct: 720 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPP 776
Query: 701 LGG 709
GG
Sbjct: 777 PGG 779
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 532 GGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFGGX 711
GG PP G PP P P GG+ PP PP GG
Sbjct: 701 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 712 XPP 720
PP
Sbjct: 759 PPP 761
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 527 PPGGXLXFPPXXGFPXXKIXXXXXPXG-PPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXL 703
PPGG PP G P P G PP GGF PPPP P +
Sbjct: 747 PPGG---LPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 704 GGXXPP 721
PP
Sbjct: 801 PDYLPP 806
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 926 GXGATXXPXGGGXPPRXGXPP--GGXKXXPPP 837
G + P GG PP G PP GG PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG PPP P
Sbjct: 753 PISGGPPPPP-PPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -3
Query: 707 PPXXGGNFXXXXPXGGGALGXKTPPXXPXXGXGAXXGXXXXKFXXGGXPXLGGNXXPPP 531
PP GG P G + PP P G G GG P + G PPP
Sbjct: 707 PPITGG---PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA--PXPKXGXXGGVFXPRAPP-PXGXXXQKFPP 696
PPGG PP G PP P + P P GG P PP P G PP
Sbjct: 731 PPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 697 XFGGXXPP 720
G P
Sbjct: 788 PPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 858 PPGGXPP--PGXXPXPPGGXGCPXPPXYP 938
PPGG PP G P PP GCP PP P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
PPGG PPP P P G G P PP P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 35.1 bits (77), Expect = 0.074
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG K PPP P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 PP--GGXLXFPPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPX 700
PP GG PP G P I P PP GG PPPP G PP
Sbjct: 303 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPP 359
Query: 701 LGG 709
GG
Sbjct: 360 PGG 362
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 532 GGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPPXFGGX 711
GG PP G PP P P GG+ PP PP GG
Sbjct: 284 GGSSALPPITGGPPPP--PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
Query: 712 XPP 720
PP
Sbjct: 342 PPP 344
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 527 PPGGXLXFPPXXGFPXXKIXXXXXPXG-PPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXL 703
PPGG PP G P P G PP GGF PPPP P +
Sbjct: 330 PPGG---LPPISGGPPPP---PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 383
Query: 704 GGXXPP 721
PP
Sbjct: 384 PDYLPP 389
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 926 GXGATXXPXGGGXPPRXGXPP--GGXKXXPPP 837
G + P GG PP G PP GG PPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPPXP 831
P GG PP PPGG PPP P
Sbjct: 336 PISGGPPPPP-PPPGGCPPPPPPPP 359
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = -3
Query: 707 PPXXGGNFXXXXPXGGGALGXKTPPXXPXXGXGAXXGXXXXKFXXGGXPXLGGNXXPPP 531
PP GG P G + PP P G G GG P + G PPP
Sbjct: 290 PPITGG---PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA--PXPKXGXXGGVFXPRAPP-PXGXXXQKFPP 696
PPGG PP G PP P + P P GG P PP P G PP
Sbjct: 314 PPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 697 XFGGXXPP 720
G P
Sbjct: 371 PPPGMFAP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA----PXPKXGXXGGVFXPRAPPPXGXXXQKFP 693
PP G PP G PP P A P P+ G PR PP G P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG----SLP 313
Query: 694 PXFGGXXPP 720
P G PP
Sbjct: 314 PPQAGGSPP 322
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 926 GXGATXXPXGGGXPP--RXGXPPGGXKXXPPPXP 831
G G+ P G PP R G PP PPP P
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 858 PPGGXPPP--GXXPXPPGGXGCPXPP 929
P G PPP G P PP G G P PP
Sbjct: 308 PTGSLPPPQAGGSP-PPAGTGSPPPP 332
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 858 PPGGXPPPGXXPX--PP-GGXGCPXPP 929
PP G PPP P PP G G P PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPP 258
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +3
Query: 858 PPGGXPPP---GXXPXPPGGXGCPXPPXYP 938
PP G PPP G P PP G P PP P
Sbjct: 275 PPTGSPPPPPAGGSPPPPRA-GSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA----PXPKXGXXGGVFXPRAPPPXGXXXQKFP 693
PP G PP G PP P A P P+ G PR PP G P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG----SLP 334
Query: 694 PXFGGXXPP 720
P G PP
Sbjct: 335 PPQAGGSPP 343
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 926 GXGATXXPXGGGXPP--RXGXPPGGXKXXPPPXP 831
G G+ P G PP R G PP PPP P
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 858 PPGGXPPP--GXXPXPPGGXGCPXPP 929
P G PPP G P PP G G P PP
Sbjct: 329 PTGSLPPPQAGGSP-PPAGTGSPPPP 353
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 858 PPGGXPPPGXXPX--PP-GGXGCPXPP 929
PP G PPP P PP G G P PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPP 279
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +3
Query: 858 PPGGXPPP---GXXPXPPGGXGCPXPPXYP 938
PP G PPP G P PP G P PP P
Sbjct: 296 PPTGSPPPPPAGGSPPPPRA-GSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXA----PXPKXGXXGGVFXPRAPPPXGXXXQKFP 693
PP G PP G PP P A P P+ G PR PP G P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG----SLP 319
Query: 694 PXFGGXXPP 720
P G PP
Sbjct: 320 PPQAGGSPP 328
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 926 GXGATXXPXGGGXPP--RXGXPPGGXKXXPPPXP 831
G G+ P G PP R G PP PPP P
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +3
Query: 858 PPGGXPPP--GXXPXPPGGXGCPXPP 929
P G PPP G P PP G G P PP
Sbjct: 314 PTGSLPPPQAGGSP-PPAGTGSPPPP 338
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 858 PPGGXPPPGXXPX--PP-GGXGCPXPP 929
PP G PPP P PP G G P PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPP 264
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +3
Query: 858 PPGGXPPP---GXXPXPPGGXGCPXPPXYP 938
PP G PPP G P PP G P PP P
Sbjct: 281 PPTGSPPPPPAGGSPPPPRA-GSPPPPPPP 309
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 861 PGGXPPPGXXPXP--PGGXGCPXPPXYP 938
PG PPPG P P PGG G PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
P G P P P PPGG P PP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPP 783
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 861 PGGXPPPGXXPXP--PGGXGCPXPPXYP 938
PG PPPG P P PGG G PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
P G P P P PPGG P PP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPP 783
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 861 PGGXPPPGXXPXP--PGGXGCPXPPXYP 938
PG PPPG P P PGG G PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
P G P P P PPGG P PP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPP 783
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 861 PGGXPPPGXXPXP--PGGXGCPXPPXYP 938
PG PPPG P P PGG G PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
P G P P P PPGG P PP
Sbjct: 760 PSGPSPVPRPAPAPPGGRQAPMPP 783
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.52
Identities = 21/67 (31%), Positives = 23/67 (34%)
Frame = +2
Query: 527 PPGGXLXFPPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLG 706
PP L PP G P GPP + GF PPPP N+ G
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNA----G 754
Query: 707 GXXPPXG 727
PP G
Sbjct: 755 APPPPFG 761
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 944 PXGVXXGXGATXXPXGGGXPPRXGXPPGGXKXXPPPXP 831
P G+ G P G G PP G PP G PP P
Sbjct: 709 PPGIP-GYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 526 PPGGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXGXXXQKFPP 696
PP G PP F AP P G G PPP G PP
Sbjct: 728 PPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPP 784
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPGG 857
G GG G P PGG G PGG PGG
Sbjct: 98 GTPGGPGNPGGPGGLG-TPGGPGTPGG 123
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPGG 857
G GG G P PGG G PGG PGG
Sbjct: 125 GNPGGLGGPGNPGGPG-TPGGPGTPGG 150
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
P G P PG P PPG G P PP P
Sbjct: 230 PQEGSPVPGD-PGPPGDSGIPGPPGPP 255
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPP 929
P G P P P PGG G P PP
Sbjct: 232 PQGPPGPSGAPGAPGGPGYPGPP 254
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXP 926
P G P P P PPGG G P P
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGP 172
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +1
Query: 529 PGGGXXFPPXXGXPPXKNFXXXXPXXAPXPKXGXXGGVFXPRAPPPXG 672
PG FPP G P P AP P G F P AP P G
Sbjct: 279 PGMPGAFPPGQGGP---GMPGSFPPGAPGPGGPGMPGSFAPGAPGPGG 323
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 653 GPPPPXGXXXKNSPPXLGGXXPP 721
GPPPP G PP L G PP
Sbjct: 1572 GPPPPRGGSHCQGPPPLMGGPPP 1594
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Frame = +2
Query: 551 PPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPP-------PXGXXXKNSPPXLGG 709
PP G P GPP + GG QGPPP G PP GG
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPR----GGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG 1609
Query: 710 XXPP 721
PP
Sbjct: 1610 PPPP 1613
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 905 PXGGGXPPRXGXPPGGXKXXPPP 837
P GG PPR G PP G PPP
Sbjct: 1587 PLMGGPPPRLGMPPPG---PPPP 1606
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/73 (35%), Positives = 27/73 (36%)
Frame = -3
Query: 746 PXXFFXXPXGGXXPPXXGGNFXXXXPXGGGALGXKTPPXXPXXGXGAXXGXXXXKFXXGG 567
P F P G PP GG P GG +G PP G G G GG
Sbjct: 144 PQGMFNVPTG--PPPLMGGGGDPRGPPGG--MGG--PPGH--GGMGGPPGHGGQ----GG 191
Query: 566 XPXLGGNXXPPPG 528
P GG PPPG
Sbjct: 192 PPGHGGMGGPPPG 204
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Frame = -1
Query: 928 GGXGQPX-PPGGXGXXPGG---GXPPG 860
GG G P PPGG G PG G PPG
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPG 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/73 (35%), Positives = 27/73 (36%)
Frame = -3
Query: 746 PXXFFXXPXGGXXPPXXGGNFXXXXPXGGGALGXKTPPXXPXXGXGAXXGXXXXKFXXGG 567
P F P G PP GG P GG +G PP G G G GG
Sbjct: 424 PQGMFNVPTG--PPPLMGGGGDPRGPPGG--MGG--PPGH--GGMGGPPGHGGQ----GG 471
Query: 566 XPXLGGNXXPPPG 528
P GG PPPG
Sbjct: 472 PPGHGGMGGPPPG 484
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Frame = -1
Query: 928 GGXGQPX-PPGGXGXXPGG---GXPPG 860
GG G P PPGG G PG G PPG
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPG 465
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G P G P PG G P PP YP
Sbjct: 178 GLPGDGPTPGSPGPPGPPGPPGYP 201
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 599 PXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P GPP G GPP P G + PP + G P G
Sbjct: 228 PPGPPGPPGAP-GNDGPPGPPGPKGAPGPDGPPGVDGQSGPPG 269
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
PG PPG P PPG G PP P
Sbjct: 223 PGDSGPPGP-PGPPGAPGNDGPPGPP 247
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
PPG PPG P PG G P PP
Sbjct: 102 PPGPPGPPGE-PGQPGSAGPPGPP 124
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G GG G P PPG G PG G P G
Sbjct: 438 GAPGGSGAP-PPGPPGAYPGNGAPGG 462
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = +3
Query: 861 PGGXPPPGXX-----PXPPGGXGCPXPPXYP 938
PGG PPG P PPG G P P P
Sbjct: 179 PGGDAPPGEAGPKGPPGPPGSPGAPGEPGRP 209
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G GQP PGG G PG PPG
Sbjct: 233 GQAGPDGQPGAPGGPG-TPGSKGPPG 257
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G PPP P PP G G P PP P
Sbjct: 232 GAPPP--PPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G PPP P PP G G P PP P
Sbjct: 218 GAPPP--PPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G PPP P PP G G P PP P
Sbjct: 218 GAPPP--PPLPPVGAGAPPPPPPP 239
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
PPG PPG P PGG G PP P
Sbjct: 236 PPGPPGPPGP-PGNPGGIGPRGPPGDP 261
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = +3
Query: 864 GGXPPP----GXXPXPPGGXGCPXPPXYP 938
GG PPP G P PP G P PP P
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 6/29 (20%)
Frame = +3
Query: 861 PGGXPPP------GXXPXPPGGXGCPXPP 929
PGG PPP G P PP G P PP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>U40797-7|AAB37546.1| 195|Caenorhabditis elegans Hypothetical
protein C28C12.3 protein.
Length = 195
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 928 GGXGQPXPPGGXGXXPGGGXPP 863
GG G P PGG G G G PP
Sbjct: 23 GGRGGPHGPGGHGPRGGPGLPP 44
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 920 GATXXPXGGGXPPRXGXPPGGXKXXPPPXP 831
G P GGG PPR GG PP P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPP 929
PP G P G P PPGG G PP
Sbjct: 425 PPQGGPG-GFGPPPPGGPGAYGPP 447
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +2
Query: 527 PPGGXLXFPPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLG 706
PP P G P G P GG GPPPP G PP
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT-- 449
Query: 707 GXXPPXG 727
PP G
Sbjct: 450 -GFPPVG 455
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCP 920
P G P G P PPGG G P
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAP 420
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXG--CPXPPXYP 938
PPGG PG P GG G P PP P
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGP 441
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 920 GATXXPXGGGXPPRXGXPPGGXKXXPPPXP 831
G P GGG PPR GG PP P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 928 GGXGQPXPPGGXGXXPGGGXPPGG 857
GG QP PPG G PG PGG
Sbjct: 269 GGAAQPGPPGPPG-PPGNDGQPGG 291
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 928 GGXGQPXPPGGXGXXPGGGXPPGG 857
G G P PPG G PGG PGG
Sbjct: 275 GPPGPPGPPGNDG-QPGGPGQPGG 297
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPG G PGGG PG
Sbjct: 172 GPAGPAGPPGPPGPDG-APGGGSGPG 196
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPG G PGGG PG
Sbjct: 172 GPAGPAGPPGPPGPDG-APGGGSGPG 196
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 858 PPGGXPP---PGXXPXPPGGXGCPXPPXYP 938
PP G PP PG PPG G PP P
Sbjct: 161 PPRGYPPAPAPGVYMPPPGMPGAYPPPRMP 190
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +3
Query: 858 PPGGXPP---PGXXPXPPGGXGCPXPPXYP 938
PP G PP PG PPG G PP P
Sbjct: 161 PPRGYPPAPAPGVYMPPPGMPGAYPPPRMP 190
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 551 PPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P G P P PP K G GPP P G PP G P G
Sbjct: 113 PGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNG 171
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 599 PXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P GPP G GPP P G + PP G P G
Sbjct: 223 PPGPPGPPGAP-GNDGPPGPPGPKGAPGPDGPPGADGQSGPPG 264
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
PG PPG P PPG G PP P
Sbjct: 218 PGDSGPPGP-PGPPGAPGNDGPPGPP 242
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
P G P P P PPG G P P P
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLP 174
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G P P P PPG G P P P
Sbjct: 181 GEPGPKGPPGPPGAPGAPGTPGEP 204
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
P G P P P PPG G P P P
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLP 174
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 599 PXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P GPP G GPP P G + PP G P G
Sbjct: 223 PPGPPGPPGAP-GNDGPPGPPGPKGAPGPDGPPGADGQSGPPG 264
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
PG PPG P PPG G PP P
Sbjct: 218 PGDSGPPGP-PGPPGAPGNDGPPGPP 242
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 551 PPXXGFPXXKIXXXXXPXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P G P P PP K G GPP P G PP G P G
Sbjct: 115 PGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNG 173
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 861 PGGXPPPGXXPXPPGGXGCPXPPXYP 938
P G P P P PPG G P P P
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLP 174
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 867 GXPPPGXXPXPPGGXGCPXPPXYP 938
G P P P PPG G P P P
Sbjct: 181 GEPGPKGPPGPPGAPGAPGTPGEP 204
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 599 PXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P GPP GG +GPP P G + P GG P G
Sbjct: 140 PAGPPGA----VGGPGPKGPPGPPGGPGELGGPGRGGNRGPPG 178
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 599 PXGPPXXKXXXXGGFXXQGPPPPXGXXXKNSPPXLGGXXPPXG 727
P GPP GG +GPP P G + P GG P G
Sbjct: 140 PAGPPGA----VGGPGPKGPPGPPGGPGELGGPGRGGNRGPPG 178
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 858 PPGGXPPPGXXPXPPGGXGCPXPPXYP 938
PP P P P PPG G P P P
Sbjct: 159 PPPCQPCPAGPPGPPGPDGTPGEPGGP 185
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPGG G PPG
Sbjct: 347 GPKGNSGPPGPPGGGTFNDGAPGPPG 372
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPGG G PPG
Sbjct: 346 GPKGNSGPPGPPGGGTFNDGAPGPPG 371
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPGG G PPG
Sbjct: 346 GPKGNSGPPGPPGGGTFNDGAPGPPG 371
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPGG G PPG
Sbjct: 347 GPKGNSGPPGPPGGGTFNDGAPGPPG 372
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 937 G*XGGXGQPXPPGGXGXXPGGGXPPG 860
G G G P PPGG G PPG
Sbjct: 383 GPKGNSGPPGPPGGGTFNDGAPGPPG 408
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 858 PPGGXPPPGXX--PXPPGGXGCPXPP 929
PPGG PPG P PG G P P
Sbjct: 179 PPGGVGPPGPNGTPGAPGDEGIPGVP 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,584,927
Number of Sequences: 27780
Number of extensions: 274831
Number of successful extensions: 3486
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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