Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_I01
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 204 1e-53
SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|ch... 34 0.024
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 6.3
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 26 6.3
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 26 6.3
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 8.4
SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces pom... 26 8.4
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 26 8.4
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 204 bits (498), Expect = 1e-53
Identities = 106/203 (52%), Positives = 131/203 (64%), Gaps = 1/203 (0%)
Frame = +1
Query: 196 TVDTKPYEGQKPGTSGLRKKVKVFVQENYTENFIQCILDVNKTSLIGSTLVVGGDGRYLV 375
T+ TKPYEGQ+PGTSGLRKKV VF Q NY ENF+Q +DV + S G+ LVVGGDGRY
Sbjct: 4 TIPTKPYEGQRPGTSGLRKKVTVFEQPNYVENFVQATMDVVEPSAKGAHLVVGGDGRYFN 63
Query: 376 KEVVDKIIKISAANGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHNPGGVDEDF 555
+ I I+A NGV K+IVG NG LSTPA S+IIRKYK GGI+LTASHN GG DF
Sbjct: 64 FHAIQVIAAIAAGNGVEKIIVGTNGYLSTPAASHIIRKYKLTGGIILTASHNAGGPKNDF 123
Query: 556 GIKFNCSNGXPASDATTDAIYKLTTSIKQYKIVPXLNCAIDKIDVHTFQVXQ-RQFTVEV 732
GIK+N NG PA ++ T+ IY +T +I +YK+V I +D+ T V + TVEV
Sbjct: 124 GIKYNLGNGGPAPESVTEKIYSITKTISEYKMV-----KIPPLDLTTTGVRRYGPLTVEV 178
Query: 733 IXAXEXYVSYIXGXLXFPEXQGF 801
I + YV + F + F
Sbjct: 179 IDPVKDYVQLMKEIFDFDLIRSF 201
>SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 587
Score = 34.3 bits (75), Expect = 0.024
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Frame = +1
Query: 232 GTSGLRKKVKV-FVQENY------TENFIQCILD-VNKTSLIGSTLVVGGDGRYLVKEVV 387
GTSGLR ++ F + N ++ F + +L V + +G +V+G D R+
Sbjct: 48 GTSGLRAEIGAGFARMNCLTVIQASQGFAEYLLQTVPSAAKLG--VVIGHDHRHKSNTFA 105
Query: 388 DKIIKISAANGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHNPGGVDEDFGIKF 567
+ G ++ TP V + ++ T G+++TASHNP + G K
Sbjct: 106 RLTAAVFLQKGFKTYFFDH--LVHTPLVPFAVKTLGTAAGVMITASHNPAAYN---GYKV 160
Query: 568 NCSNG 582
NG
Sbjct: 161 YWGNG 165
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 475 YIIRKYKTLGGIVLTASHNPGGVDED-FGIKFNCSNGXPASDATTDAI 615
Y+I+KY+ L IV+ S+ E+ I + + P+ AT DA+
Sbjct: 129 YVIKKYQNLKNIVVRLSNGTEACKEEAVLINAHVDSTLPSPGATDDAL 176
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 367 YLVKEVVDKIIKISAANGVSKLIVGQNGILSTPAVSYIIRKYKTL 501
Y +K++ K +KI N + +V N +L + KYK L
Sbjct: 246 YDMKQIYRKNLKIIGCNSLLLSLVESNSLLKNMVAKFEAGKYKVL 290
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 487 KYKTLGGIVLTASHNPGGVDEDFGIKFNCSNG 582
K KT+G +++TASHNP ED G+K ++G
Sbjct: 40 KGKTIG-VMITASHNP---VEDNGVKIIDADG 67
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 366 PSVSSDNQRRSYQRGFIHVQNALNKILRVVFLNENFNFFT 247
PS S NQ+RSY + +N K+ R +FL FF+
Sbjct: 516 PSSSQINQKRSYSTSSLFSKN--KKMNRSLFLKGGKRFFS 553
>SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 416
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 379 EVVDKIIKISAANGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHN 531
+ D I NG + +G G+ ++R+Y +LG +T +HN
Sbjct: 122 DCADDAIAAFRNNGKIAIALGVEGLHQVDTSLAVLRQYYSLGVRYITLTHN 172
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 294 KILRVVFLNENFNFFTQSTCARLLALIRFSVNRYTVRH 181
K+L +VFL+ F + QS C RL ++ + R H
Sbjct: 104 KLLFIVFLSNLFAVYLQSLCIRLGSVTGMDLARNCREH 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,287
Number of Sequences: 5004
Number of extensions: 55952
Number of successful extensions: 145
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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