Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_H23
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    91   2e-20
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   5.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   8.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   8.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   8.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   8.8  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 41/92 (44%), Positives = 59/92 (64%)
 Frame = +2

Query: 170 APVVKSSYDITPEGHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPI 349
           A +     ++  +G++  N+ET NGI  Q  G  K V++E P +  +G+  YT+PDGQ +
Sbjct: 27  AVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDGQQV 85

Query: 350 DLAYVADENGYQPQGTHLPTPHPIPEAIARAL 445
            + YVADENG+Q QG+H+PT  PIP  I RAL
Sbjct: 86  SITYVADENGFQVQGSHIPTAPPIPPEIQRAL 117


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
 Frame = +3

Query: 204 LKATSSSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPS--TSPTSLTRT 377
           L AT         +FT     P     + TP      PT   PL  NP   T    L + 
Sbjct: 178 LLATVVQAHLDTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNPQPLTGQQELLQD 237

Query: 378 VTNPREPICPPLTQFPRRSP 437
            +    P    + +F +R P
Sbjct: 238 FSKRFSPAIRGVVEFAKRIP 257


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 PATTSPLKATSSSTTRPATEFTPRLKVPSRTSTQNTPP 299
           PATT     T+++TT   T  T         S    PP
Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPP 691


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 348 STSPTSLTRTVTNPREPICPPL 413
           +  PTS  R   N ++P+ PP+
Sbjct: 453 NVQPTSKGRITLNSKDPLDPPV 474


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 279 STQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 389
           S  N   +K+   +  LP+ DNP  S  +L     NP
Sbjct: 293 SRMNLTLAKMEKTSKPLPMVDNPE-STGNLVYIYNNP 328


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +2

Query: 263 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 352
           G    V +  P  E    Y+Y  PDG   PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +2

Query: 263 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 352
           G    V +  P  E    Y+Y  PDG   PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 264 VPSRTSTQNTPPSKLRVPTSTLP 332
           +P   S   TP S +  P  TLP
Sbjct: 654 LPRPISCHTTPDSFIEAPNKTLP 676


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +2

Query: 263 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 352
           G    V +  P  E    Y+Y  PDG   PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,720
Number of Sequences: 438
Number of extensions: 3848
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)