Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_H15
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    29   3.7  
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158     29   3.7  

>10_08_0106 +
           14842748-14843085,14843122-14843250,14844145-14844211,
           14847177-14847324,14847998-14848097,14848306-14848384,
           14848527-14848687,14848829-14848908,14849319-14849475,
           14849575-14849723,14849909-14850076,14850426-14850719,
           14851002-14851046,14851213-14851462,14851707-14851835,
           14852799-14853039,14853977-14854642
          Length = 1066

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = -3

Query: 527 FPGLPQ-IXGNHIPXWGRGXXXPNPXXGAXXXXGGTERGPKPNPLSPGGGRI 375
           F G+P    G   P WG G   P    GA         G  P P  P GG +
Sbjct: 653 FAGMPMGPAGGFNPYWGGGMPLPMDYMGAPFPGPMPYMGYPPGPFDPFGGGV 704


>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
          Length = 974

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = -1

Query: 520 GYPRLXETISPXGGGXTXPPTXXPG---PGXXXGERKGAQNPTPFPRGVXGFINA 365
           G  R  E  +P GG  + P    PG   P    G+RK    P+P P    G + A
Sbjct: 288 GGSRRGEQSTPGGGRASGPRDGGPGGSRPADARGKRKQEDTPSPSPPRGGGAVRA 342


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,366,431
Number of Sequences: 37544
Number of extensions: 241091
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)