Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_H11
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41534-4|AAB47596.1|  323|Caenorhabditis elegans Hypothetical pr...   237   1e-62
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    33   0.28 
AC024808-3|AAK29925.1|  183|Caenorhabditis elegans Hypothetical ...    30   2.0  
U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical p...    30   2.6  
AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical ...    29   6.0  
U97009-8|AAC69032.1|  534|Caenorhabditis elegans Udp-glucuronosy...    28   7.9  

>U41534-4|AAB47596.1|  323|Caenorhabditis elegans Hypothetical
           protein C16A3.6 protein.
          Length = 323

 Score =  237 bits (579), Expect = 1e-62
 Identities = 106/191 (55%), Positives = 142/191 (74%), Gaps = 1/191 (0%)
 Frame = +3

Query: 123 MQHDDVVWAIINKTHCSHKVTTKTQQFCRNEYNLTGLCSRSSCPLANSKYATIREENGII 302
           MQ DDV W I+NK  C++K  TK + FC+NE NLTGLC+R+SCPLANS+YAT+REENG+ 
Sbjct: 1   MQCDDVTWNILNKGQCAYKAWTKPKMFCKNEMNLTGLCNRASCPLANSQYATVREENGVC 60

Query: 303 YLYMKTAERIMFPAKQWEKVKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYLI 482
           YLY K  ER  +P + WEK KLS++  KA+ QI++ LL+W  +++ KCK R ++I QYLI
Sbjct: 61  YLYAKVVERSHYPRRLWEKTKLSKDMNKALEQISDQLLHWSEYVRHKCKARLIRIHQYLI 120

Query: 483 RMRKLKLR-RVKELVPIQRKIXXXXXXXXXKALVAARIDNAIEKQLLERLKKGTYNDIYN 659
           RMRK+ +R   K+L+PI RK+         KALVAA++D+AIEK+LL RLK+GTY D+YN
Sbjct: 121 RMRKMAVRGNQKKLIPIGRKVERREKRREEKALVAAKLDHAIEKELLARLKQGTYGDVYN 180

Query: 660 FPQMAFDAALK 692
           F Q AF+  L+
Sbjct: 181 FRQEAFEQMLE 191


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 25/98 (25%), Positives = 44/98 (44%)
 Frame = +3

Query: 360 VKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYLIRMRKLKLRRVKELVPIQRK 539
           +  +  FEK + + N+N +   + IK K K+  VK+ + +    K  L +VKE V   +K
Sbjct: 577 ISFNYKFEKTLEKTNKNKIEMKSAIK-KVKEAIVKVEKAIGLSYKYYLEKVKEAVEEVKK 635

Query: 540 IXXXXXXXXXKALVAARIDNAIEKQLLERLKKGTYNDI 653
           +         + +  A+ +    K  LE+ K   Y  I
Sbjct: 636 VLGVNYEDCLEKIGKAQEETEKVKTELEQEKGIDYQSI 673


>AC024808-3|AAK29925.1|  183|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.6 protein.
          Length = 183

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 496 SFLIRIKYCVIFTNLCLHLALINAGQYNKFSFI*CIAFSKFL 371
           SF + I+ CV      +H   ++A  YN F+F   ++F K L
Sbjct: 48  SFQVSIEVCVRILLSLVHNVFVHASYYNVFNFENLVSFDKLL 89


>U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical
           protein K06C4.17 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 360 VKLSRNFEKAIHQINENLLYWPAFIKAKCKQRFVKITQYL 479
           + L + FEK IH+IN     WP    A  K  F+K+ QY+
Sbjct: 196 LSLPKFFEKGIHEING----WPWQTNAVEKYTFLKVVQYV 231


>AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical
           protein F56F11.5 protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = -1

Query: 407 FIYLMYCLLKVSGQFHFLPLFCWEHYSLSCLHIQINNAIFFS 282
           F++++  ++K  G F F+  FC   + L+ +H+ I+ ++F S
Sbjct: 333 FVHILKKMMKTVGMFVFI--FCTFWFVLAVVHVSISRSMFSS 372


>U97009-8|AAC69032.1|  534|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein12 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 618 TIVFLLHYLFWQQLKPSLLFFSPVF 544
           T +FLL +LF++     +L F+P+F
Sbjct: 5   TFIFLLTFLFFECYSSKILIFNPIF 29


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,077,993
Number of Sequences: 27780
Number of extensions: 383847
Number of successful extensions: 1220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)