Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_H03
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical pr...   155   4e-38
U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical pr...    80   2e-15
U53343-2|AAQ81274.1|  196|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AF022985-5|AAB69974.1|  299|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical
           protein M153.1 protein.
          Length = 279

 Score =  155 bits (376), Expect = 4e-38
 Identities = 95/262 (36%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
 Frame = +1

Query: 121 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXXXX 300
           MKIGFIG G++A ALA G I++G    D I AS    D       + LG     +N    
Sbjct: 1   MKIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVV 60

Query: 301 XXXXXXXXXXXXXXXXPALKEIKNLPSAKNKLFISVAMGITIATVESNLPSEARVIRVMP 480
                               EI    S K  L +S+A+GITI  +ES LP+++RV+RVMP
Sbjct: 61  QKSDVVFLAVKPVHVSKVASEIAPALS-KEHLVVSIALGITIRNIESLLPTKSRVVRVMP 119

Query: 481 NTPALVKEGAAAFSRGTKATAEDAQLTSQLFKAVGTCDEVPEYQMDAITALSGSGPAYVY 660
           NTP++V+ GA+AF+ G+     DA+   +L   VG   EVPE  +D +T LSGSGP+Y++
Sbjct: 120 NTPSVVRAGASAFAMGSACRDGDAETVEKLLSTVGFAVEVPEIHIDPVTGLSGSGPSYMF 179

Query: 661 MLIESLADGGVRCGXXXXXXXXXXXXXXXGSAAMVKLVIIQPC-*KTMSPVPQGLPLREH 837
            +IE LADGGV+ G               G+A MV    I P   K     P G  +   
Sbjct: 180 AVIEGLADGGVKVGLPRDLALKLAAYTLLGAAKMVLETGIHPAQLKDDVQSPAGSSVYGM 239

Query: 838 ITWXKNGFRSAIIGAVSAAVNK 903
                 G +  ++ AV AA N+
Sbjct: 240 HKLESGGLKGVLMDAVEAATNR 261


>U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical
           protein F55G1.9 protein.
          Length = 299

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 73/279 (26%), Positives = 117/279 (41%), Gaps = 16/279 (5%)
 Frame = +1

Query: 115 EAMKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXX 294
           E++   FIGGG +A A+  G  + G      I          SA+ ++ LG   +F N  
Sbjct: 13  ESVPFVFIGGGNMAAAIIKGCQNKGFTPKSNIVIGVQTEK--SAEKWRQLGYKNVFTNTL 70

Query: 295 XXXXXXXXXXXXXXXXXXPALKEIKNLP-SAKNKLFISVAMGITIATVESNLP---SEAR 462
                                + + + P +++ +  ISV  G+ +  + + LP       
Sbjct: 71  EMLERYSTAIYVICVKPQVFEEVVSSWPVNSRPEFIISVMAGVPLKVLNAKLPFVSGNTT 130

Query: 463 VIRVMPNTPALVKEGAAA--FSRGTKATAEDA--QLTSQLFKAVGTCDEVPEYQMDAITA 630
           ++R+MPN  + +  GA+   + +  K   +D+  +L  +  + VGT + +PE   +   A
Sbjct: 131 IVRLMPNVASSIGAGASTMCYEKNEKIMNQDSHIELAREFAECVGTVELIPERCFNPAMA 190

Query: 631 LSGSGPAYVYMLIESLADGGVRCGXXXXXXXXXXXXXXXGSAAMVKL------VIIQ--P 786
           + GS PA+ +M IESLADG V  G               G+A MV        +  Q   
Sbjct: 191 IGGSSPAWTFMYIESLADGAVAQGLGRAEAKRLAAQAVLGAAQMVLNSNSGFDIETQHFG 250

Query: 787 C*KTMSPVPQGLPLREHITWXKNGFRSAIIGAVSAAVNK 903
             K M   P G  +       KNGFR A++ AV AA  K
Sbjct: 251 SLKDMVCSPGGTTIEGVRALEKNGFRYAVMEAVVAASTK 289


>U53343-2|AAQ81274.1|  196|Caenorhabditis elegans Hypothetical
           protein F22F4.5 protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 647 GPLPLRAVIASIWYSGTSSQVP-TALKSCD 561
           GP P+R ++  I Y  T+ QVP T  K CD
Sbjct: 41  GPHPIRTMVDGIDYCATAIQVPITTQKKCD 70


>Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical
           protein B0491.5 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 352 ALKEIKNLPSAKNKLFISVAMGITIATVESNL 447
           A   I++     N  F SVA+G T+AT++SN+
Sbjct: 235 AASSIRHKDDVHNHWFASVAVGSTVATMKSNV 266


>AF022985-5|AAB69974.1|  299|Caenorhabditis elegans Hypothetical
           protein T15B7.8 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 414 HGNGNEELILCRGQVFYLFKSG--YHDIRLDRYYHHF 310
           H NGNE L+LC        + G  +HD  +D  Y +F
Sbjct: 259 HTNGNETLVLCYQMKRAAVQQGLVHHDPDVDAIYRYF 295


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,948,645
Number of Sequences: 27780
Number of extensions: 425471
Number of successful extensions: 994
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)