Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_G22
(990 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein. 33 1.6
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 2.8
AY898961-1|AAX84028.1| 540|Homo sapiens type XXIII collagen pro... 32 2.8
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 2.8
AY158895-1|AAO18361.1| 540|Homo sapiens alpha 1 type XXIII coll... 32 2.8
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 2.8
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 2.8
L34357-1|AAA58496.1| 442|Homo sapiens GATA-4 protein. 32 3.7
BC105108-1|AAI05109.1| 442|Homo sapiens GATA binding protein 4 ... 32 3.7
BC101580-1|AAI01581.1| 442|Homo sapiens GATA binding protein 4 ... 32 3.7
AY740706-1|AAW51922.1| 442|Homo sapiens GATA binding protein 4 ... 32 3.7
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 6.5
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 6.5
U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein. 31 6.5
L20433-1|AAA65605.1| 420|Homo sapiens octamer binding transcrip... 31 6.5
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 31 6.5
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 31 6.5
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 6.5
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 31 6.5
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 6.5
AL355338-2|CAH70367.1| 532|Homo sapiens Zic family member 2 (od... 31 6.5
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 31 6.5
AF193855-1|AAG28409.1| 532|Homo sapiens zinc finger protein of ... 31 6.5
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 6.5
AF104902-1|AAC96325.1| 533|Homo sapiens ZIC2 protein protein. 31 6.5
BC142651-1|AAI42652.1| 167|Homo sapiens FLJ44815 protein protein. 31 8.6
BC133004-1|AAI33005.1| 167|Homo sapiens FLJ44815 protein protein. 31 8.6
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 31 8.6
AK126768-1|BAC86680.1| 167|Homo sapiens protein ( Homo sapiens ... 31 8.6
>X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein.
Length = 331
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG GG G GG PGG GG A G
Sbjct: 63 GGGPRGGGGGPGGGGPGGGGGGAAGGGG 90
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 687 APXQPPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPP 809
AP PE P A R PG P+ G +P P PP
Sbjct: 82 APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
>AY898961-1|AAX84028.1| 540|Homo sapiens type XXIII collagen
protein.
Length = 540
Score = 32.3 bits (70), Expect = 2.8
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = +3
Query: 561 PDGXPXRHXREAQRQXPXPSGXRARXRXXHPXTXXAGXXXXXAPXQPPEXPXAXRGXPGX 740
P G P R + +R P P G R P P P P +G PG
Sbjct: 119 PPGPPGRRGKPGRRGDPGPPGQSGRDGYPGP------LGLDGKPGLP--GPKGEKGAPGD 170
Query: 741 XXPR----XXGAXNPXXXPXXXXPRPPPXXXXXXXXRGXTG 851
PR GA P P R PP RG G
Sbjct: 171 FGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQG 211
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 687 APXQPPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPP 809
AP PE P A R PG P+ G +P P PP
Sbjct: 82 APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
>AY158895-1|AAO18361.1| 540|Homo sapiens alpha 1 type XXIII
collagen protein.
Length = 540
Score = 32.3 bits (70), Expect = 2.8
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = +3
Query: 561 PDGXPXRHXREAQRQXPXPSGXRARXRXXHPXTXXAGXXXXXAPXQPPEXPXAXRGXPGX 740
P G P R + +R P P G R P P P P +G PG
Sbjct: 119 PPGPPGRRGKPGRRGDPGPPGQSGRDGYPGP------LGLDGKPGLP--GPKGEKGAPGD 170
Query: 741 XXPR----XXGAXNPXXXPXXXXPRPPPXXXXXXXXRGXTG 851
PR GA P P R PP RG G
Sbjct: 171 FGPRGDQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQG 211
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 687 APXQPPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPP 809
AP PE P A R PG P+ G +P P PP
Sbjct: 82 APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 2.8
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 687 APXQPPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPP 809
AP PE P A R PG P+ G +P P PP
Sbjct: 82 APGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
>L34357-1|AAA58496.1| 442|Homo sapiens GATA-4 protein.
Length = 442
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 973 GGAXGXXGGXPGGSXGGXAXXXGPLV----PGPXQEGXXXGA-XXAPVXPR 836
GGA GG GGS GG A GP PG Q G A PV PR
Sbjct: 57 GGAGSASGGPSGGSPGGAASGAGPGTQQGSPGWSQAGATGAAYTPPPVSPR 107
>BC105108-1|AAI05109.1| 442|Homo sapiens GATA binding protein 4
protein.
Length = 442
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 973 GGAXGXXGGXPGGSXGGXAXXXGPLV----PGPXQEGXXXGA-XXAPVXPR 836
GGA GG GGS GG A GP PG Q G A PV PR
Sbjct: 57 GGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPR 107
>BC101580-1|AAI01581.1| 442|Homo sapiens GATA binding protein 4
protein.
Length = 442
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 973 GGAXGXXGGXPGGSXGGXAXXXGPLV----PGPXQEGXXXGA-XXAPVXPR 836
GGA GG GGS GG A GP PG Q G A PV PR
Sbjct: 57 GGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPR 107
>AY740706-1|AAW51922.1| 442|Homo sapiens GATA binding protein 4
protein.
Length = 442
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = -3
Query: 973 GGAXGXXGGXPGGSXGGXAXXXGPLV----PGPXQEGXXXGA-XXAPVXPR 836
GGA GG GGS GG A GP PG Q G A PV PR
Sbjct: 57 GGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPR 107
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 699 PPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPPP 812
PP P G G P GA P P P PPP
Sbjct: 367 PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP 404
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 699 PPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPPP 812
PP P G G P GA P P P PPP
Sbjct: 367 PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP 404
>U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein.
Length = 423
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG GG G GG PGG GG G
Sbjct: 152 GGGGPGGGGGPGGGGPGGGGGGGPGGGG 179
>L20433-1|AAA65605.1| 420|Homo sapiens octamer binding
transcription factor 1 protein.
Length = 420
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG GG G GG PGG GG G
Sbjct: 149 GGGGPGGGGGPGGGGPGGGGGGGPGGGG 176
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXGPLVPGP 887
GG GG G GG G GG GP+ GP
Sbjct: 310 GGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGP 343
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXGPLVPGP 887
GG GG G GG G GG GP+ GP
Sbjct: 310 GGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGP 343
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 699 PPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPPP 812
PP P G G P GA P P P PPP
Sbjct: 367 PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP 404
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXGPLVPGP 887
GG GG G GG G GG GP+ GP
Sbjct: 310 GGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGP 343
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 699 PPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPPP 812
PP P G G P GA P P P PPP
Sbjct: 379 PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP 416
>AL355338-2|CAH70367.1| 532|Homo sapiens Zic family member 2
(odd-paired homolog, Drosophila) protein.
Length = 532
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG+ +GG G GG GGS GG + G
Sbjct: 491 GGSGSGGGGGGAGGGGGGSSGGGSGTAG 518
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXGPLVPGP 887
GG GG G GG G GG GP+ GP
Sbjct: 316 GGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGP 349
>AF193855-1|AAG28409.1| 532|Homo sapiens zinc finger protein of
cerebellum ZIC2 protein.
Length = 532
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG+ +GG G GG GGS GG + G
Sbjct: 491 GGSGSGGGGGGAGGGGGGSSGGGSGTAG 518
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.1 bits (67), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 699 PPEXPXAXRGXPGXXXPRXXGAXNPXXXPXXXXPRPPP 812
PP P G G P GA P P P PPP
Sbjct: 367 PPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPP 404
>AF104902-1|AAC96325.1| 533|Homo sapiens ZIC2 protein protein.
Length = 533
Score = 31.1 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGGXAXXXG 905
GG+ +GG G GG GGS GG + G
Sbjct: 492 GGSGSGGGGGGAGGGGGGSSGGGSGTAG 519
>BC142651-1|AAI42652.1| 167|Homo sapiens FLJ44815 protein protein.
Length = 167
Score = 30.7 bits (66), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 RVHET-RSPKVXCGLLAAGSGXPHXXPXPRSHW 174
R+H R+P+V C + G+G H P PR W
Sbjct: 48 RMHAPHRAPEVFCSRSSRGAGRGHPTPTPRVRW 80
>BC133004-1|AAI33005.1| 167|Homo sapiens FLJ44815 protein protein.
Length = 167
Score = 30.7 bits (66), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 RVHET-RSPKVXCGLLAAGSGXPHXXPXPRSHW 174
R+H R+P+V C + G+G H P PR W
Sbjct: 48 RMHAPHRAPEVFCSRSSRGAGRGHPTPTPRVRW 80
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 30.7 bits (66), Expect = 8.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 988 GGAXAGGAXGXXGGXPGGSXGG 923
GG GG G GG PGG GG
Sbjct: 156 GGGPGGGPGGGGGGGPGGGGGG 177
>AK126768-1|BAC86680.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ44815 fis, clone BRACE3045078. ).
Length = 167
Score = 30.7 bits (66), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 RVHET-RSPKVXCGLLAAGSGXPHXXPXPRSHW 174
R+H R+P+V C + G+G H P PR W
Sbjct: 48 RMHAPHRAPEVFCSRSSRGAGRGHPTPTPRVRW 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,883,307
Number of Sequences: 237096
Number of extensions: 1181773
Number of successful extensions: 5912
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4812
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13269380858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -