Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP20_F_G22
         (990 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   7.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   9.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   9.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   9.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   9.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   9.8  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   9.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   9.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   9.8  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P +  P  ++ +++   R   P TP P
Sbjct: 371 CGNFPPRSMEPWISMQEQIPRFRHIGPSTPFP 402


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 131 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 162


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 127 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 158


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 146 CGXPEPAASSPHXTLGDRVSWTRXTTPXTPXP 51
           CG   P    P  ++ ++V   R   P TP P
Sbjct: 352 CGNFPPRPMGPWISIQEQVPRFRYIGPPTPFP 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,110
Number of Sequences: 438
Number of extensions: 1917
Number of successful extensions: 50
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32774469
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)